RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 PDZK1IP1Q13113 114 aa10.23□□□□□ -0.77
TRAPPC9-202ENST00000438773 MS4A18Q3C1V0 323 aa10.23□□□□□ -0.77
TRAPPC9-202ENST00000438773 PAN3Q58A45 887 aaKnown RBP10.23□□□□□ -0.77
TRAPPC9-202ENST00000438773 SLC51BQ86UW2 128 aa10.23□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR51A2Q8NGJ7 313 aa10.23□□□□□ -0.77
TRAPPC9-202ENST00000438773 PPP1R35Q8TAP8 253 aa10.23□□□□□ -0.77
TRAPPC9-202ENST00000438773 RNF133Q8WVZ7 376 aa10.23□□□□□ -0.77
TRAPPC9-202ENST00000438773 UBL7Q96S82 380 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC9-202ENST00000438773 A0A0G2JK05 382 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 SDCBPO00560 298 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 IGF2P01344 180 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 TPT1P13693 172 aaKnown RBP10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 COL19A1Q14993 1142 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 ANKRD16Q6P6B7 361 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 SLC25A26Q70HW3 274 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 PPP1R32Q7Z5V6 425 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR8B12Q8NGG6 310 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 KISS1RQ969F8 398 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 C14orf79Q96F83 325 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 CXorf58Q96LI9 332 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 LINC00052Q96N35 136 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 C12orf57Q99622 126 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 RTN4RQ9BZR6 473 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 NUP210Q8TEM1 1887 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 MYO15AQ9UKN7 3530 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 SPTBN1Q01082 2364 aaKnown RBP10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 BORCS7-ASMTA0A0B4J1R7 106 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 ZNF133P52736 654 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 LINC01590Q5TEZ4 76 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 SUMF1Q8NBK3 374 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 NFAM1Q8NET5 270 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR4S1Q8NGB4 309 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 NANPQ8TBE9 248 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 ASB5Q8WWX0 329 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 HGDQ93099 445 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 TRAF4Q9BUZ4 470 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 PTTG3PQ9NZH4 202 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 FANCMQ8IYD8 2048 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 COL4A3Q01955 1670 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 C2orf16Q68DN1 1984 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 ZNF705GA8MUZ8 300 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 GLSO94925 669 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 RPA2P15927 270 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 CD80P33681 288 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 THBS4P35443 961 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 MMP16P51512 607 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR4C16Q8NGL9 310 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 RRNAD1Q96FB5 475 aaKnown RBP10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 CMTM3Q96MX0 182 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 SULT4A1Q9BR01 284 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 ZMIZ1Q9ULJ6 1067 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 DENND4CQ5VZ89 1909 aa10.22□□□□□ -0.77
TRAPPC9-202ENST00000438773 G3V3Q6 166 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 DHRS3O75911 302 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 OPRM1P35372 400 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 RHEBQ15382 184 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 KISS1Q15726 138 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 FAM122BQ7Z309 247 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 TUSC5Q8IXB3 177 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 LIN37Q96GY3 246 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 FOXJ2Q9P0K8 574 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 IGLV1-36A0A0B4J1U3 117 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 PMS2P1A4D2B8 440 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 TRIM77I1YAP6 450 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 SERPINE2P07093 398 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 SP1P08047 785 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 SFTPCP11686 197 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 SPATA46Q5T0L3 261 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 CATSPERDQ86XM0 798 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 SCARB1Q8WTV0 552 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 PROCRQ9UNN8 238 aa10.21□□□□□ -0.77
TRAPPC9-202ENST00000438773 ZNF816-ZNF321PA0A0X1KG74 233 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 FAM221AA4D161 298 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 PCNX2A6NKB5 2137 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 DNPH1O43598 174 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 WNT11O96014 354 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZNF17P17021 662 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 CLINT1Q14677 625 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 PLXDC2Q6UX71 529 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 LINC00114Q6XXX2 140 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 PGLYRP3Q96LB9 341 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 KCNK17Q96T54 332 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 TRAPPC2LQ9UL33 140 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 COL6A6A6NMZ7 2263 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 MEIKINA0A087WXM9 373 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 CTAG2O75638 210 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 GLAP06280 429 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 RAC2P15153 192 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 MZT1Q08AG7 82 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZNF695Q8IW36 515 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 APOBEC3DQ96AK3 386 aaPredicted RBP10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 CMBLQ96DG6 245 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 NKX6-2Q9C056 277 aaPredicted RBP10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 CNTD2Q9H8S5 307 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZNF71Q9NQZ8 489 aaPredicted RBP10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 MRPL22Q9NWU5 206 aaKnown RBP10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 AUP1Q9Y679 476 aa10.21□□□□□ -0.78
TRAPPC9-202ENST00000438773 RANBP2P49792 3224 aaKnown RBP10.2□□□□□ -0.78
TRAPPC9-202ENST00000438773 SZT2Q5T011 3432 aa10.2□□□□□ -0.78
TRAPPC9-202ENST00000438773 TMEM272A0A1B0GTI8 110 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms