RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 WDR86Q86TI4 376 aa15.56■□□□□ 0.08
HDAC6-208ENST00000438518 TPRA1Q86W33 373 aa15.56■□□□□ 0.08
HDAC6-208ENST00000438518 PNLDC1Q8NA58 520 aaKnown RBP15.56■□□□□ 0.08
HDAC6-208ENST00000438518 OR51A2Q8NGJ7 313 aa15.56■□□□□ 0.08
HDAC6-208ENST00000438518 TRMT10AQ8TBZ6 339 aaKnown RBP15.56■□□□□ 0.08
HDAC6-208ENST00000438518 CHCHD6Q9BRQ6 235 aa15.56■□□□□ 0.08
HDAC6-208ENST00000438518 FGF23Q9GZV9 251 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-208ENST00000438518 METTL17Q9H7H0 456 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-208ENST00000438518 UNC79Q9P2D8 2635 aa15.56■□□□□ 0.08
HDAC6-208ENST00000438518 A6NLC8 198 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 NDUFS8O00217 210 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 GABARAPO95166 117 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 CYB5AP00167 134 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 ACAA1P09110 424 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-208ENST00000438518 ZNF93P35789 620 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-208ENST00000438518 HAAOP46952 286 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 MTNR1BP49286 362 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 IL24Q13007 206 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 FAM27D1Q5T7N8 215 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 PRAMEF6Q5VXH4 476 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 GLT8D1Q68CQ7 371 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 C22orf42Q6IC83 251 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 ZSCAN4Q8NAM6 433 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-208ENST00000438518 ZNF671Q8TAW3 534 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 NPRL2Q8WTW4 380 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 TMIGD2Q96BF3 282 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 UQCC2Q9BRT2 126 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 PPIL3Q9H2H8 161 aaKnown RBP15.55■□□□□ 0.08
HDAC6-208ENST00000438518 CHODLQ9H9P2 273 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 RHOFQ9HBH0 211 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 APCP25054 2843 aa15.55■□□□□ 0.08
HDAC6-208ENST00000438518 HECTD1Q9ULT8 2610 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 LOC100506127A0A0U1RQW1 187 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 FSTL3O95633 263 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 MAS1P04201 325 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 HAGHLQ6PII5 290 aaPredicted RBP15.54■□□□□ 0.08
HDAC6-208ENST00000438518 PRSS57Q6UWY2 283 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 LRRTM1Q86UE6 522 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 MOGAT3Q86VF5 341 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 MKXQ8IYA7 352 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 SAXO1Q8IYX7 474 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 SCCPDHQ8NBX0 429 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 OR52N4Q8NGI2 321 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 AQP3Q92482 292 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 ORAI1Q96D31 301 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 PERPQ96FX8 193 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 GPER1Q99527 375 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 TMEM106BQ9NUM4 274 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 CENPEQ02224 2701 aa15.54■□□□□ 0.08
HDAC6-208ENST00000438518 DYSFO75923 2080 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 ASH1LQ9NR48 2969 aaKnown RBP15.53■□□□□ 0.08
HDAC6-208ENST00000438518 CLDN25C9JDP6 229 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 CDIPTO14735 213 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 NOS1APO75052 506 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-208ENST00000438518 RP2O75695 350 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 CD37P11049 281 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 PDLIM4P50479 330 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 TMEM33P57088 247 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 RIN1Q13671 783 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 BLMHQ13867 455 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 MPPED2Q15777 294 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 CLEC2AQ6UVW9 174 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 WDR82Q6UXN9 313 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 PEG10Q86TG7 708 aaKnown RBP15.53■□□□□ 0.08
HDAC6-208ENST00000438518 C11orf53Q8IXP5 236 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 Q8IYB0 196 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 PXT1Q8NFP0 134 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 RAB2BQ8WUD1 216 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 RPL3LQ92901 407 aaKnown RBP15.53■□□□□ 0.08
HDAC6-208ENST00000438518 FOXC2Q99958 501 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 CENPOQ9BU64 300 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 C1orf123Q9NWV4 160 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 RNF7Q9UBF6 113 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 NPTNQ9Y639 398 aa15.53■□□□□ 0.08
HDAC6-208ENST00000438518 IGKV1-27A0A075B6S5 117 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 hCG_1807616A0A1W2PRN6 198 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 NOL3O60936 208 aaKnown RBP15.52■□□□□ 0.08
HDAC6-208ENST00000438518 TMEM127O75204 238 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 NDUFS7O75251 213 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 TMBIM6P55061 237 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 PDZK1IP1Q13113 114 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 SPRNQ5BIV9 151 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 DMRTC1Q5HYR2 192 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 GPR107Q5VW38 600 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 SATL1Q86VE3 508 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 CALHM1Q8IU99 346 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 ZNF420Q8TAQ5 688 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-208ENST00000438518 CCL17Q92583 94 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 TIMD4Q96H15 378 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 PCDHB16Q9NRJ7 776 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 UFSP2Q9NUQ7 469 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 GHRLQ9UBU3 117 aa15.52■□□□□ 0.08
HDAC6-208ENST00000438518 TACC2O95359 2948 aa15.51■□□□□ 0.07
HDAC6-208ENST00000438518 TMEM178BH3BS89 294 aa15.51■□□□□ 0.07
HDAC6-208ENST00000438518 SSX4O60224 188 aa15.51■□□□□ 0.07
HDAC6-208ENST00000438518 CDC14BO60729 498 aa15.51■□□□□ 0.07
HDAC6-208ENST00000438518 ADRA2CP18825 462 aa15.51■□□□□ 0.07
HDAC6-208ENST00000438518 RAB3BP20337 219 aa15.51■□□□□ 0.07
HDAC6-208ENST00000438518 GIFP27352 417 aa15.51■□□□□ 0.07
HDAC6-208ENST00000438518 CFPP27918 469 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms