RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SULF2Q8IWU5 870 aa16.23■□□□□ 0.19
CLK1-205ENST00000434813 INO80EQ8NBZ0 244 aaPredicted RBP16.23■□□□□ 0.19
CLK1-205ENST00000434813 CSNK2A3Q8NEV1 391 aa16.23■□□□□ 0.19
CLK1-205ENST00000434813 RTBDNQ9BSG5 229 aaPredicted RBP16.23■□□□□ 0.19
CLK1-205ENST00000434813 ZNF471Q9BX82 626 aaPredicted RBP16.23■□□□□ 0.19
CLK1-205ENST00000434813 PPA2Q9H2U2 334 aa16.23■□□□□ 0.19
CLK1-205ENST00000434813 RAB18Q9NP72 206 aa16.23■□□□□ 0.19
CLK1-205ENST00000434813 JMJD7P0C870 316 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 ACKR3P25106 362 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 NTF4P34130 210 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 SUPT4H1P63272 117 aaKnown RBP16.22■□□□□ 0.19
CLK1-205ENST00000434813 KRTAP27-1Q3LI81 207 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 MOB3CQ70IA8 216 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 ESX1Q8N693 406 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 OR5AP2Q8NGF4 316 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 OR1F12Q8NHA8 337 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 OR2V1Q8NHB1 315 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 ZNF775Q96BV0 537 aaPredicted RBP16.22■□□□□ 0.19
CLK1-205ENST00000434813 Q96M66 194 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 ZNF75AQ96N20 296 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 ALKBH3Q96Q83 286 aaPredicted RBP16.22■□□□□ 0.19
CLK1-205ENST00000434813 CDC6Q99741 560 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 ZPBPQ9BS86 351 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 TMEM9BQ9NQ34 198 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 GPR173Q9NS66 373 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 EHFQ9NZC4 300 aa16.22■□□□□ 0.19
CLK1-205ENST00000434813 NCKAP5O14513 1909 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 OR6C6A6NF89 314 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 CXCL13O43927 109 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 RFPL3SP0C7P2 107 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 HGFACQ04756 655 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 SURF2Q15527 256 aaPredicted RBP16.21■□□□□ 0.19
CLK1-205ENST00000434813 BEX5Q5H9J7 111 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 ACER2Q5QJU3 275 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 ZNF774Q6NX45 483 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 C6orf15Q6UXA7 325 aaPredicted RBP16.21■□□□□ 0.19
CLK1-205ENST00000434813 AAED1Q7RTV5 226 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 GALNTL5Q7Z4T8 443 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 PRSS33Q8NF86 280 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 OR2AE1Q8NHA4 323 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 CT55Q8WUE5 264 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 CPNE2Q96FN4 548 aaPredicted RBP16.21■□□□□ 0.19
CLK1-205ENST00000434813 REEP6Q96HR9 211 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 DNTTIP1Q9H147 329 aa16.21■□□□□ 0.19
CLK1-205ENST00000434813 ELL3Q9HB65 397 aaPredicted RBP16.21■□□□□ 0.19
CLK1-205ENST00000434813 BARX1Q9HBU1 254 aaPredicted RBP16.21■□□□□ 0.19
CLK1-205ENST00000434813 C13orf42A0A1B0GVH6 325 aa16.21■□□□□ 0.18
CLK1-205ENST00000434813 SERPINA7P05543 415 aa16.21■□□□□ 0.18
CLK1-205ENST00000434813 TCN2P20062 427 aa16.21■□□□□ 0.18
CLK1-205ENST00000434813 TCF15Q12870 199 aa16.21■□□□□ 0.18
CLK1-205ENST00000434813 RSPO4Q2I0M5 234 aaPredicted RBP16.21■□□□□ 0.18
CLK1-205ENST00000434813 TUSC1Q2TAM9 212 aa16.21■□□□□ 0.18
CLK1-205ENST00000434813 FAM74A1Q5RGS3 127 aa16.21■□□□□ 0.18
CLK1-205ENST00000434813 RIPPLY2Q5TAB7 128 aa16.21■□□□□ 0.18
CLK1-205ENST00000434813 OR10D3Q8NH80 312 aa16.21■□□□□ 0.18
CLK1-205ENST00000434813 ARPC5LQ9BPX5 153 aa16.21■□□□□ 0.18
CLK1-205ENST00000434813 GPR160Q9UJ42 338 aa16.21■□□□□ 0.18
CLK1-205ENST00000434813 MRPS18CQ9Y3D5 142 aaKnown RBP16.21■□□□□ 0.18
CLK1-205ENST00000434813 SPEF1Q9Y4P9 236 aa16.21■□□□□ 0.18
CLK1-205ENST00000434813 CSAG2Q9Y5P2 127 aa16.21■□□□□ 0.18
CLK1-205ENST00000434813 CACNA1HO95180 2353 aa16.2■□□□□ 0.18
CLK1-205ENST00000434813 HTR3BO95264 441 aa16.2■□□□□ 0.18
CLK1-205ENST00000434813 B4GALT1P15291 398 aa16.2■□□□□ 0.18
CLK1-205ENST00000434813 MTCP1P56278 107 aa16.2■□□□□ 0.18
CLK1-205ENST00000434813 SSPNQ14714 243 aa16.2■□□□□ 0.18
CLK1-205ENST00000434813 CNN3Q15417 329 aaKnown RBP16.2■□□□□ 0.18
CLK1-205ENST00000434813 SLC9A3R2Q15599 337 aa16.2■□□□□ 0.18
CLK1-205ENST00000434813 CHRFAM7AQ494W8 412 aa16.2■□□□□ 0.18
CLK1-205ENST00000434813 SLC38A6Q8IZM9 456 aa16.2■□□□□ 0.18
CLK1-205ENST00000434813 ROBO4Q8WZ75 1007 aa16.2■□□□□ 0.18
CLK1-205ENST00000434813 PCSK5Q92824 1860 aa16.2■□□□□ 0.18
CLK1-205ENST00000434813 FIGNL2A6NMB9 653 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 TEX46H3BTG2 121 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 SDCBPO00560 298 aaPredicted RBP16.19■□□□□ 0.18
CLK1-205ENST00000434813 RRP8O43159 456 aaKnown RBP16.19■□□□□ 0.18
CLK1-205ENST00000434813 HOXD4P09016 255 aaPredicted RBP16.19■□□□□ 0.18
CLK1-205ENST00000434813 RPS2P15880 293 aaKnown RBP16.19■□□□□ 0.18
CLK1-205ENST00000434813 ZNF32P17041 273 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 PI3P19957 117 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 STARP49675 285 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 PLXDC2Q6UX71 529 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 TIPARPQ7Z3E1 657 aaKnown RBP16.19■□□□□ 0.18
CLK1-205ENST00000434813 GLRX5Q86SX6 157 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 MAFIPQ8WZ33 124 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 TAAR9Q96RI9 348 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 METTL9Q9H1A3 318 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 DEPPQ9NTK1 212 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 ZNF391Q9UJN7 358 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 MCTS1Q9ULC4 181 aaKnown RBP16.19■□□□□ 0.18
CLK1-205ENST00000434813 SDK2Q58EX2 2172 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 TMEM225BP0DP42 221 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 PRKACBP22694 351 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 GABRR1P24046 479 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 SNTB1Q13884 538 aaKnown RBP16.19■□□□□ 0.18
CLK1-205ENST00000434813 ANKRD55Q3KP44 614 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 WIPI1Q5MNZ9 446 aaPredicted RBP16.19■□□□□ 0.18
CLK1-205ENST00000434813 C6orf201Q7Z4U5 140 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 STOML3Q8TAV4 291 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 DCUN1D4Q92564 292 aa16.19■□□□□ 0.18
CLK1-205ENST00000434813 EMG1Q92979 244 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms