RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 LAMB2P55268 1798 aa1.9□□□□□ -2.1
HMGB1P27-201ENST00000431429 ECM29Q5VYK3 1845 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 IGHV1OR15-9A0A0B4J2B8 117 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 A0A0B4J2E0 115 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF705GA8MUZ8 300 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 H3BN98 237 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 M0QZ92 97 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 PLPP1O14494 284 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 BPY2O14599 106 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 GMDSO60547 372 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 SLC16A7O60669 478 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 CTNSO60931 367 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 SEMA3DO95025 777 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 CATP04040 527 aaKnown RBP1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 GLAP06280 429 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 RAB5AP20339 215 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 CD70P32970 193 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 SSTR5P35346 364 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 CXCL12P48061 93 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 BCAP31P51572 246 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 CCNG1P51959 295 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 UBE2E1P51965 193 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 UCNP55089 124 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 TSC22D1Q15714 1073 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 C12orf54Q6X4T0 127 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 SLC35D2Q76EJ3 337 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 MRPL55Q7Z7F7 128 aaKnown RBP1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 SLC34A3Q8N130 599 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 KIF2BQ8N4N8 673 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 CBR4Q8N4T8 237 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 TRAM1L1Q8N609 369 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 METTL13Q8N6R0 699 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR11H7Q8NGC8 314 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR5W2Q8NH69 310 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 PPTC7Q8NI37 304 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 CA5BP1Q8WTZ4 195 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 C17orf50Q8WW18 174 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 PTX4Q96A99 478 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 ISOC2Q96AB3 205 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 KIAA1143Q96AT1 154 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 CLDN23Q96B33 292 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 TM4SF18Q96CE8 201 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 UBE2E2Q96LR5 201 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 CAMK2N2Q96S95 79 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 NAA50Q9GZZ1 169 aaKnown RBP1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 MED4Q9NPJ6 270 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 UBIAD1Q9Y5Z9 338 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 VPS13AQ96RL7 3174 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 DMXL1Q9Y485 3027 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 MAP1BP46821 2468 aaKnown RBP1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 NRCAMQ92823 1304 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 COL4A1P02462 1669 aa1.9□□□□□ -2.11
HMGB1P27-201ENST00000431429 AK9Q5TCS8 1911 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 BPTFQ12830 3046 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 USP9XQ93008 2570 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 NAV2Q8IVL1 2488 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 ARPC4-TTLL3A0A0A6YYG9 625 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR6C74A6NCV1 312 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 NVLO15381 856 aaKnown RBP1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 RRP8O43159 456 aaKnown RBP1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 ENTPD5O75356 428 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 REM1O75628 298 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 TGM6O95932 706 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 CISD3P0C7P0 127 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 CD37P11049 281 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 PSMC3P17980 439 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 PGAM1P18669 254 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 AZU1P20160 251 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 IL32P24001 234 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 IVDP26440 423 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 GABRR2P28476 465 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 HOXA6P31267 233 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 CARD18P57730 90 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 RAP1AP62834 184 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 ART3Q13508 389 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 DGCR6Q14129 220 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 EBI3Q14213 229 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 HNRNPA1L2Q32P51 320 aaKnown RBP1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 RWDD4Q6NW29 188 aaKnown RBP1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 Q6ZVH6 145 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 SLC16A13Q7RTY0 426 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR2W3Q7Z3T1 314 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 UNC93AQ86WB7 457 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF547Q8IVP9 402 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 PGAM4Q8N0Y7 254 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 DAW1Q8N136 415 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 CYB561D1Q8N8Q1 229 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR5T3Q8NGG3 340 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR10G6Q8NH81 332 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 UBALD1Q8TB05 177 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 LRRC29Q8WV35 223 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 MITD1Q8WV92 249 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 PIH1D2Q8WWB5 315 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 BAALCQ8WXS3 180 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 CIDECQ96AQ7 238 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 TIMM17AQ99595 171 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 TMEM175Q9BSA9 504 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 SLIRPQ9GZT3 109 aaKnown RBP1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR52D1Q9H346 318 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms