RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 NPAS2Q99743 824 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 RBM4BQ9BQ04 359 aaKnown RBP3.29□□□□□ -1.88
HMGB3-203ENST00000430118 NAT9Q9BTE0 207 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 FGFBP2Q9BYJ0 223 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 REG4Q9BYZ8 158 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 BARHL1Q9BZE3 327 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 HDHD2Q9H0R4 259 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 SDF2L1Q9HCN8 221 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 ABCB10Q9NRK6 738 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 TAS2R16Q9NYV7 291 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 EHFQ9NZC4 300 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 ARMCX1Q9P291 453 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 SLC17A7Q9P2U7 560 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 METTL1Q9UBP6 276 aaKnown RBP3.29□□□□□ -1.88
HMGB3-203ENST00000430118 DUX4Q9UBX2 424 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF639Q9UID6 485 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 SSR3Q9UNL2 185 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 FARSAQ9Y285 508 aaKnown RBP3.29□□□□□ -1.88
HMGB3-203ENST00000430118 FBXO7Q9Y3I1 522 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 OR51B4Q9Y5P0 310 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 ALG5Q9Y673 324 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 TRPM6Q9BX84 2022 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 LRP4O75096 1905 aa3.29□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF469Q96JG9 3925 aaPredicted RBP3.28□□□□□ -1.88
HMGB3-203ENST00000430118 MED13LQ71F56 2210 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 SHANK1Q9Y566 2161 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 MTORP42345 2549 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 ANKHD1Q8IWZ3 2542 aaKnown RBP3.28□□□□□ -1.88
HMGB3-203ENST00000430118 SPG11Q96JI7 2443 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 CROCCQ5TZA2 2017 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 A0A075B6Q4 140 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 A0A0D9SEW6 157 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 MEX3AA1L020 520 aaKnown RBP3.28□□□□□ -1.88
HMGB3-203ENST00000430118 HELTA6NFD8 242 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 OR52A4PA6NMU1 304 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF716A6NP11 495 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 IDSB3KWA1 339 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 TRDCB7Z8K6 153 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 CCL21O00585 134 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 PLIN3O60664 434 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 HCN1O60741 890 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 SCRG1O75711 98 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 RLN2P04090 185 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 SP1P08047 785 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 HCKP08631 526 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 IGFBP1P08833 259 aaPredicted RBP3.28□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF735P0CB33 412 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 OR8G3PP0DMU2 310 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 IDSP22304 550 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 ME2P23368 584 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 CA5AP35218 305 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 COILP38432 576 aaPredicted RBP3.28□□□□□ -1.88
HMGB3-203ENST00000430118 PMELP40967 661 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 MAGEA5P43359 124 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 CDKN1BP46527 198 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 CAPZBP47756 277 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 KPNA2P52292 529 aaKnown RBP3.28□□□□□ -1.88
HMGB3-203ENST00000430118 ECH1Q13011 328 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 SLAMF1Q13291 335 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 DGCR6Q14129 220 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 CHI3L2Q15782 390 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 NEDD8Q15843 81 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF239Q16600 458 aaKnown RBP3.28□□□□□ -1.88
HMGB3-203ENST00000430118 PCK2Q16822 640 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 RFX4Q33E94 735 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 TEX44Q53QW1 395 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 RNASE10Q5GAN6 216 aaKnown RBP3.28□□□□□ -1.88
HMGB3-203ENST00000430118 CTSL3PQ5NE16 218 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 ACER2Q5QJU3 275 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 LGSNQ5TDP6 509 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 HACD4Q5VWC8 232 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 ANKRD22Q5VYY1 191 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 FAAP20Q6NZ36 180 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 DOK6Q6PKX4 331 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 ADAMTSL5Q6ZMM2 481 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 FAM183BPQ6ZVS7 135 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 H2AFVQ71UI9 128 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 SMIM15Q7Z3B0 74 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 P2RY8Q86VZ1 359 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 TGIF2LXQ8IUE1 241 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 CRLF3Q8IUI8 442 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 BPIFB2Q8N4F0 458 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 YIPF7Q8N8F6 280 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 PRELID2Q8N945 189 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 OR8J1Q8NGP2 316 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 OR4K15Q8NH41 348 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 OR1F12Q8NHA8 337 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 MCFD2Q8NI22 146 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 C11orf45Q8TAV5 145 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 SLC37A2Q8TED4 501 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 PAQR8Q8TEZ7 354 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 NPRL2Q8WTW4 380 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 CA5BP1Q8WTZ4 195 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 GLYATL2Q8WU03 294 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 C22orf15Q8WYQ4 148 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 MAFIPQ8WZ33 124 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 NR4A3Q92570 626 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 CCDC124Q96CT7 223 aaKnown RBP3.28□□□□□ -1.88
HMGB3-203ENST00000430118 YIPF6Q96EC8 236 aa3.28□□□□□ -1.88
HMGB3-203ENST00000430118 DNAJA3Q96EY1 480 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms