RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 MALSU1Q96EH3 234 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 SYT4Q9H2B2 425 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 TAS2R4Q9NYW5 299 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 SPRR3Q9UBC9 169 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 ZNF230Q9UIE0 474 aaPredicted RBP8.35□□□□□ -1.07
NEDD1-203ENST00000429527 PCDHB10Q9UN67 800 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 HELZ2Q9BYK8 2649 aaKnown RBP8.35□□□□□ -1.07
NEDD1-203ENST00000429527 A0A1B0GTH9 108 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 MBD3L4A6NDZ8 208 aaPredicted RBP8.35□□□□□ -1.07
NEDD1-203ENST00000429527 MBD3L3A6NE82 208 aaPredicted RBP8.35□□□□□ -1.07
NEDD1-203ENST00000429527 MBD3L5A6NJ08 208 aaPredicted RBP8.35□□□□□ -1.07
NEDD1-203ENST00000429527 TPT1P13693 172 aaKnown RBP8.35□□□□□ -1.07
NEDD1-203ENST00000429527 ABOP16442 354 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 ZNF17P17021 662 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 PSMB6P28072 239 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 OPRM1P35372 400 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 B3GALT5-AS1P59052 145 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 PPP1R1AQ13522 171 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 HIST3H3Q16695 136 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 C1orf185Q5T7R7 199 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 HLA-DQA1Q5Y7H0 255 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 POMZP3Q6PJE2 187 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 NAA40Q86UY6 237 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 PUSL1Q8N0Z8 303 aaKnown RBP8.35□□□□□ -1.07
NEDD1-203ENST00000429527 COMMD1Q8N668 190 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 OR4A4PQ8NGN8 299 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 MBD3L2Q8NHZ7 208 aaPredicted RBP8.35□□□□□ -1.07
NEDD1-203ENST00000429527 RNF141Q8WVD5 230 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 ST8SIA1Q92185 356 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 MRPL13Q9BYD1 178 aaKnown RBP8.35□□□□□ -1.07
NEDD1-203ENST00000429527 CST11Q9H112 138 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 ATG5Q9H1Y0 275 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 GHRLQ9UBU3 117 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 FAM215AQ9Y5M1 114 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 A0A087WZY1 265 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 NPIPA5E9PKD4 350 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 OR2T1O43869 369 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 CBR3O75828 277 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 NAT2P11245 290 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 PGCP20142 388 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 FPR2P25090 351 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 BDKRB2P30411 391 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 ACKR1Q16570 336 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 TMEM128Q5BJH2 165 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 TMEM268Q5VZI3 342 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 CRIP3Q6Q6R5 217 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 SLC16A14Q7RTX9 510 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 KDM8Q8N371 416 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 SLC22A24Q8N4F4 322 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 POC1AQ8NBT0 407 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 TMEM230Q96A57 120 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 SCRT1Q9BWW7 348 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 SLC5A7Q9GZV3 580 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 NPIPA1Q9UND3 350 aa8.35□□□□□ -1.07
NEDD1-203ENST00000429527 TRGV5A0A0B4J1U4 118 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 SFT2D2O95562 160 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 GLAP06280 429 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 MSX1P28360 303 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 SOX2P48431 317 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 NR0B1P51843 470 aaKnown RBP8.34□□□□□ -1.07
NEDD1-203ENST00000429527 SUCLG1P53597 346 aaKnown RBP8.34□□□□□ -1.07
NEDD1-203ENST00000429527 ATP1B3P54709 279 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 MOGAT2Q3SYC2 334 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 GLYATL3Q5SZD4 288 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 DNM1P34Q6PK57 102 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 BTNL8Q6UX41 500 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 C16orf47Q6ZP98 133 aaPredicted RBP8.34□□□□□ -1.07
NEDD1-203ENST00000429527 ZNF584Q8IVC4 421 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 WDSUB1Q8N9V3 476 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 DACT3Q96B18 629 aaPredicted RBP8.34□□□□□ -1.07
NEDD1-203ENST00000429527 NARS2Q96I59 477 aaKnown RBP8.34□□□□□ -1.07
NEDD1-203ENST00000429527 TM2D1Q9BX74 207 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 RTN4RQ9BZR6 473 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 RCC2Q9P258 522 aaKnown RBP8.34□□□□□ -1.07
NEDD1-203ENST00000429527 LPAR3Q9UBY5 353 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 SLC22A13Q9Y226 551 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 WIF1Q9Y5W5 379 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 LOC107986453A0A1B0GWG9 222 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 METTL21EPA6NDL7 271 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 FIGNL2A6NMB9 653 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 CCL21O00585 134 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 MFNGO00587 321 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 RPP14O95059 124 aaKnown RBP8.34□□□□□ -1.07
NEDD1-203ENST00000429527 AMY2AP04746 511 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 CTLA4P16410 223 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 CHRNB4P30926 498 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 CAV2P51636 162 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 LUMP51884 338 aaPredicted RBP8.34□□□□□ -1.07
NEDD1-203ENST00000429527 GLO1Q04760 184 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 PJVKQ0ZLH3 352 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 NKAPLQ5M9Q1 402 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 BAP18Q8IXM2 172 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 OR4D6Q8NGJ1 314 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 ARL11Q969Q4 196 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 FAM46BQ96A09 425 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 POM121Q96HA1 1249 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 PPP4R1LQ9P1A2 415 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 OR52A1Q9UKL2 312 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 GTF2A1LQ9UNN4 478 aa8.34□□□□□ -1.07
NEDD1-203ENST00000429527 LIPGQ9Y5X9 500 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms