RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 A0A0J9YY10 115 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 OPN1MWP04001 364 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 CXCL1P09341 107 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 OPN1MW2P0DN77 364 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 OPN1MW3P0DN78 364 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 RBX1P62877 108 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 HLA-DRB3P79483 266 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 ENDOGQ14249 297 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 ELOBQ15370 118 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 IAH1Q2TAA2 248 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 C1orf194Q5T5A4 169 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 Q6ZN92 141 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 PLXDC1Q8IUK5 500 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 ZSCAN4Q8NAM6 433 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 OR14L1PQ8NHC6 308 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 PFN4Q8NHR9 129 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 LMF2Q9BU23 707 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 NTNG1Q9Y2I2 539 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 PLXNA4Q9HCM2 1894 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 MEGF11A6BM72 1044 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 METTL12A8MUP2 240 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 NUDT14O95848 222 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 LCATP04180 440 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 CD1AP06126 327 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 RAB32Q13637 225 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 CLEC12BQ2HXU8 276 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 ACOT6Q3I5F7 207 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 OR8G2PQ6IF36 304 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 OR2L13Q8N349 312 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 MIEN1Q9BRT3 115 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 SLC26A1Q9H2B4 701 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 FBXL17Q9UF56 701 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 ZNF860A6NHJ4 632 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 FAM157CP0CG43 387 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 KCTD18Q6PI47 426 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 MRPL52Q86TS9 123 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 SGPP2Q8IWX5 399 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 FAM3DQ96BQ1 224 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 SERTAD3Q9UJW9 196 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 RAMP1O60894 148 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 MST1LQ2TV78 715 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 C2orf50Q96LR7 162 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 SIGLEC7Q9Y286 467 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 RBFOX3A6NFN3 312 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 NKX6-3A6NJ46 265 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 TMEM150CB9EJG8 249 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 DUS4LO95620 317 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 WNT11O96014 354 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 JMJD7P0C870 316 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 CCKBRP32239 447 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 ADIRFQ15847 76 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 LDLRAD2Q5SZI1 272 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 TMEM9BQ9NQ34 198 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 DAPP1Q9UN19 280 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 HSPB2A8KAH6 182 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 B4GALT2O60909 372 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 SRSF5Q13243 272 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 HSPB2Q16082 182 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 OR6N2Q8NGY6 317 aa12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 SEPSECSQ9HD40 501 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-203ENST00000428982 C17orf105B2RV13 164 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 HCRTR2O43614 444 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 BRS3P32247 399 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 GPR18Q14330 331 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 PHF19Q5T6S3 580 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 DNM1P34Q6PK57 102 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 TRAPPC6BQ86SZ2 158 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 TMEM106AQ96A25 262 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 A0A1W2PPV9 198 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 FITM1A5D6W6 292 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 H7BYZ3 331 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 ZNF264O43296 627 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 CSTBP04080 98 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 OR5H8P0DN80 308 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 PPICP45877 212 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 SUCLG1P53597 346 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 GAS1P54826 345 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 SCGB2A2Q13296 93 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 LINC01555Q8NAE3 123 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 ZNF485Q8NCK3 441 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 DUSP23Q9BVJ7 150 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 ZNF701Q9NV72 531 aaPredicted RBP12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 NPIPA5A0A0B4J1W7 369 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 LOC100289279A0A1B0GTE1 492 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 PRAMEF27A3QJZ7 478 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 B4DEV8 164 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 KNG1P01042 644 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 SCAND1P57086 179 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 ARFRP1Q13795 201 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 LPAL2Q16609 132 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 REEP6Q96HR9 211 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 MFRPQ9BY79 579 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 PRTFDC1Q9NRG1 225 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 CACNA1CQ13936 2221 aa12.85□□□□□ -0.35
SYNGAP1-203ENST00000428982 H0YL77 283 aa12.84□□□□□ -0.35
SYNGAP1-203ENST00000428982 GNMTQ14749 295 aa12.84□□□□□ -0.35
SYNGAP1-203ENST00000428982 SLC25A42Q86VD7 318 aa12.84□□□□□ -0.35
SYNGAP1-203ENST00000428982 CADM4Q8NFZ8 388 aa12.84□□□□□ -0.35
SYNGAP1-203ENST00000428982 SLC37A2Q8TED4 501 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms