RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 RTN4RL2Q86UN3 420 aa14.19□□□□□ -0.14
C9orf3-206ENST00000428313 GPR84Q9NQS5 396 aa14.19□□□□□ -0.14
C9orf3-206ENST00000428313 DAPP1Q9UN19 280 aa14.19□□□□□ -0.14
C9orf3-206ENST00000428313 ZFP30Q9Y2G7 519 aa14.19□□□□□ -0.14
C9orf3-206ENST00000428313 OR1A2Q9Y585 309 aa14.19□□□□□ -0.14
C9orf3-206ENST00000428313 GRXCR1A8MXD5 290 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 CA11O75493 328 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 HLA-DQA2P01906 255 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 ALDH3B1P43353 468 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 ENPP2Q13822 863 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 RUNX2Q13950 521 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 PLAC9Q5JTB6 97 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 TMEM215Q68D42 235 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 ZNF705AQ6ZN79 300 aaPredicted RBP14.18□□□□□ -0.14
C9orf3-206ENST00000428313 CACUL1Q86Y37 369 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 MAML2Q8IZL2 1156 aaPredicted RBP14.18□□□□□ -0.14
C9orf3-206ENST00000428313 TMEM170AQ8WVE7 144 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 HAS2Q92819 552 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 NICN1Q9BSH3 213 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 LMF2Q9BU23 707 aaKnown RBP14.18□□□□□ -0.14
C9orf3-206ENST00000428313 ZNF700Q9H0M5 742 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 G6PC2Q9NQR9 355 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.18□□□□□ -0.14
C9orf3-206ENST00000428313 CACNA1CQ13936 2221 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 MPDZO75970 2070 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 A0A0A6YYD4 124 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 LOC102723971A0A1B0GUV8 181 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 CRYM-AS1A6NIL9 109 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 K7EQS6 105 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 TCF21O43680 179 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 KNG1P01042 644 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 CTSDP07339 412 aaPredicted RBP14.18□□□□□ -0.14
C9orf3-206ENST00000428313 CMPK1P30085 196 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 ID2Q02363 134 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 FAM189A2Q15884 450 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 FAM90A2PQ658T7 463 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 VN1R4Q7Z5H5 301 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 RABEPKQ7Z6M1 372 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 TMEM25Q86YD3 366 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 CYB5D2Q8WUJ1 264 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 C20orf144Q9BQM9 153 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 ZPBPQ9BS86 351 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 EHFQ9NZC4 300 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 NAGKQ9UJ70 344 aa14.18□□□□□ -0.14
C9orf3-206ENST00000428313 B3GALT2O43825 422 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 IGKV1D-16P01601 117 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 ZNF43P17038 809 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 ATP6V0CP27449 155 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 PPM1AP35813 382 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 CSNK1A1P48729 337 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 RPL23AP62750 156 aaKnown RBP14.17□□□□□ -0.14
C9orf3-206ENST00000428313 FOXK1P85037 733 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 PRDX4Q13162 271 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 ADAMTSL4Q6UY14 1074 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 DPPA3Q6W0C5 159 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 COX15Q7KZN9 410 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 ZFP62Q8NB50 900 aaPredicted RBP14.17□□□□□ -0.14
C9orf3-206ENST00000428313 ADPRHL1Q8NDY3 354 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 OR52N5Q8NH56 324 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 ABHD6Q9BV23 337 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 MRPL22Q9NWU5 206 aaKnown RBP14.17□□□□□ -0.14
C9orf3-206ENST00000428313 RCL1Q9Y2P8 373 aaKnown RBP14.17□□□□□ -0.14
C9orf3-206ENST00000428313 EMC9Q9Y3B6 208 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 GOLGA4Q13439 2230 aaKnown RBP14.17□□□□□ -0.14
C9orf3-206ENST00000428313 TCRBV21S2A2A0A5A6 115 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 LMX1BO60663 402 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 OR6A2O95222 327 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 SCGB1D1O95968 90 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 SMIM10L1P0DMW3 83 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 ZFP36L1Q07352 338 aaKnown RBP14.17□□□□□ -0.14
C9orf3-206ENST00000428313 P2RY6Q15077 328 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 TMEM241Q24JQ0 296 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 NUP54Q7Z3B4 507 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 ZNF440Q8IYI8 595 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 CPEB3Q8NE35 698 aaKnown RBP14.17□□□□□ -0.14
C9orf3-206ENST00000428313 CTHRC1Q96CG8 243 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 SMIM10Q96HG1 83 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 MIEN1Q9BRT3 115 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 SDF2L1Q9HCN8 221 aa14.17□□□□□ -0.14
C9orf3-206ENST00000428313 B4E171 279 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 HPRT1P00492 218 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 CSTAP01040 98 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 RPS15AP62244 130 aaKnown RBP14.16□□□□□ -0.14
C9orf3-206ENST00000428313 CSNK2A1P68400 391 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-206ENST00000428313 RIPPLY2Q5TAB7 128 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 ATG4DQ86TL0 474 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-206ENST00000428313 SULF2Q8IWU5 870 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 CRIPAKQ8N1N5 446 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 CSNK2A3Q8NEV1 391 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 OR14L1PQ8NHC6 308 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 ABHD14AQ9BUJ0 271 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 DNAJC4Q9NNZ3 241 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 SDCBPO00560 298 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-206ENST00000428313 PLRG1O43660 514 aaKnown RBP14.16□□□□□ -0.14
C9orf3-206ENST00000428313 RAD51DO75771 328 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 CT62P0C5K7 136 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 MDKP21741 143 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-206ENST00000428313 GALNSP34059 522 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 ELLP55199 621 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-206ENST00000428313 GABREP78334 506 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms