RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 IFNA7P01567 189 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 FOXO1Q12778 655 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 DCAF10Q5QP82 559 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 PLCXD3Q63HM9 321 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 NAXDQ8IW45 347 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 OR5H2Q8NGV7 314 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 KCNG3Q8TAE7 436 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 STRADBQ9C0K7 418 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 C5orf66Q9H5L9 145 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 SHPKQ9UHJ6 478 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 BSNQ9UPA5 3926 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 IGKV1-12A0A0C4DH73 117 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 LOC390937A0A1W2PQ73 354 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 ETV2O00321 342 aaPredicted RBP10.38□□□□□ -0.75
PTPRN-204ENST00000423636 EIF1BO60739 113 aaKnown RBP10.38□□□□□ -0.75
PTPRN-204ENST00000423636 OR7C1O76099 320 aaPredicted RBP10.38□□□□□ -0.75
PTPRN-204ENST00000423636 MT-CO3P00414 261 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 IGKV1D-12P01611 117 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 RAG2P55895 527 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 DRAM2Q6UX65 266 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 GSG1LQ6UXU4 331 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 STPG2Q8N412 459 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 PRR18Q8N4B5 295 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 DEFB124Q8NES8 71 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 SEMA6DQ8NFY4 1073 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 OR5M9Q8NGP3 310 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 OR13G1Q8NGZ3 307 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 OR1F12Q8NHA8 337 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 LINC00052Q96N35 136 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 VRK1Q99986 396 aaPredicted RBP10.38□□□□□ -0.75
PTPRN-204ENST00000423636 PRSS50Q9UI38 385 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 FOXD3Q9UJU5 478 aaPredicted RBP10.38□□□□□ -0.75
PTPRN-204ENST00000423636 CHD8Q9HCK8 2581 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 INTS1Q8N201 2190 aaKnown RBP10.38□□□□□ -0.75
PTPRN-204ENST00000423636 A0A1B0GV50 99 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 MSTNO14793 375 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 EFSO43281 561 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 RP2O75695 350 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 TFF1P04155 84 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 ADH6P28332 368 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 SSPNQ14714 243 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 CHRFAM7AQ494W8 412 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 RNFT1Q5M7Z0 435 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 NUFIP2Q7Z417 695 aaKnown RBP10.37□□□□□ -0.75
PTPRN-204ENST00000423636 OR2M7Q8NG81 312 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 SPTSSAQ969W0 71 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 LIME1Q9H400 295 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 TMEM38BQ9NVV0 291 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 NPTNQ9Y639 398 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 PLCE1Q9P212 2302 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 OR2A4O95047 310 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 IL5P05113 134 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 SRD5A2P31213 254 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 GPM6AP51674 278 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 GRB2P62993 217 aaKnown RBP10.37□□□□□ -0.75
PTPRN-204ENST00000423636 DNM1P46Q6ZS02 220 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 SLC25A26Q70HW3 274 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 C17orf78Q8N4C9 275 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 OR5T2Q8NGG2 359 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 TMEM54Q969K7 222 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 MARS2Q96GW9 593 aaKnown RBP10.37□□□□□ -0.75
PTPRN-204ENST00000423636 SGCZQ96LD1 299 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 OR2A7Q96R45 310 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 TAAR9Q96RI9 348 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 UTP23Q9BRU9 249 aaKnown RBP10.37□□□□□ -0.75
PTPRN-204ENST00000423636 PECRQ9BY49 303 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 GSX2Q9BZM3 304 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 WNT5BQ9H1J7 359 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 SH2D2AQ9NP31 389 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 ITGB1BP2Q9UKP3 347 aa10.37□□□□□ -0.75
PTPRN-204ENST00000423636 COL6A6A6NMZ7 2263 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 HSPB2A8KAH6 182 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 SNRPGP15A8MWD9 76 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 HSPB2Q16082 182 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 ANKRD55Q3KP44 614 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 ESCO2Q56NI9 601 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 SPICQ8N5J4 248 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 TMEM251Q8N6I4 163 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 OR11L1Q8NGX0 322 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 LRRC20Q8TCA0 184 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 FOXRED1Q96CU9 486 aaPredicted RBP10.36□□□□□ -0.75
PTPRN-204ENST00000423636 RBMXL1Q96E39 390 aaKnown RBP10.36□□□□□ -0.75
PTPRN-204ENST00000423636 BORCS8Q96FH0 119 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 SULT4A1Q9BR01 284 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 ZNF2Q9BSG1 426 aaPredicted RBP10.36□□□□□ -0.75
PTPRN-204ENST00000423636 TTTY12Q9BZ98 90 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 GPR35Q9HC97 309 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 COMMD9Q9P000 198 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 LHX6Q9UPM6 363 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 TLN1Q9Y490 2541 aaKnown RBP10.36□□□□□ -0.75
PTPRN-204ENST00000423636 MSGN1A6NI15 193 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 F5H0A9 414 aaPredicted RBP10.36□□□□□ -0.75
PTPRN-204ENST00000423636 PDGFAP04085 211 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 SERPINA7P05543 415 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 CPN1P15169 458 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 ACP1P24666 158 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 ZNF239Q16600 458 aaKnown RBP10.36□□□□□ -0.75
PTPRN-204ENST00000423636 TMEM164Q5U3C3 297 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 C15orf40Q8WUR7 153 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 DCUN1D4Q92564 292 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms