RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 BPIFB2Q8N4F0 458 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 OR14K1Q8NGZ2 314 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 NUDT16L1Q9BRJ7 211 aaKnown RBP9.12□□□□□ -0.95
USP49-204ENST00000423567 AMBNQ9NP70 447 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 INPP5EQ9NRR6 644 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 GPR173Q9NS66 373 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 SLC7A11Q9UPY5 501 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 KIR2DS1A0A191URI9 304 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 LOC107986453A0A1B0GWG9 222 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 IRGMA1A4Y4 181 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 ANKRD61A6NGH8 418 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 H3BSH0 61 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 J3QRE1 110 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 AKR7A2O43488 359 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 ECDO95905 644 aaPredicted RBP9.11□□□□□ -0.95
USP49-204ENST00000423567 RPSAP08865 295 aaKnown RBP9.11□□□□□ -0.95
USP49-204ENST00000423567 GLRA1P23415 457 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 OR12D2P58182 307 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 ISL1P61371 349 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 PAX8Q06710 450 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 MRPL28Q13084 256 aaKnown RBP9.11□□□□□ -0.95
USP49-204ENST00000423567 GALEQ14376 348 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 C11orf91Q3C1V1 193 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 HAGHLQ6PII5 290 aaPredicted RBP9.11□□□□□ -0.95
USP49-204ENST00000423567 ZNF841Q6ZN19 808 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 C1orf229Q6ZS94 237 aaPredicted RBP9.11□□□□□ -0.95
USP49-204ENST00000423567 EGFL6Q8IUX8 553 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 SYS1Q8N2H4 156 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 PRSS35Q8N3Z0 413 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 DHRSXQ8N5I4 330 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 PNLDC1Q8NA58 520 aaKnown RBP9.11□□□□□ -0.95
USP49-204ENST00000423567 OR2G2Q8NGZ5 317 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 TMIGD2Q96BF3 282 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 C10orf35Q96D05 121 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 C4orf36Q96KX1 117 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 JMJD8Q96S16 334 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 CCL13Q99616 98 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 ALG8Q9BVK2 526 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 DNTTIP1Q9H147 329 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 OR51I2Q9H344 312 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 DCLRE1BQ9H816 532 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 KAAG1Q9UBP8 84 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 OPN4Q9UHM6 478 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 POLDIP2Q9Y2S7 368 aa9.11□□□□□ -0.95
USP49-204ENST00000423567 A0A0A6YYJ9 748 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 A6NIN4 97 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 DVL1O14640 695 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 TNFRSF13BO14836 293 aaPredicted RBP9.1□□□□□ -0.95
USP49-204ENST00000423567 NDUFB3O43676 98 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 IGHA1P01876 353 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 LIPFP07098 398 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 OCM2P0CE71 109 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 OCMP0CE72 109 aaPredicted RBP9.1□□□□□ -0.95
USP49-204ENST00000423567 PPIAL4GP0DN37 164 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 ZNF20P17024 532 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 HAAOP46952 286 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 CCR9P51686 369 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 IL18R1Q13478 541 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 MED21Q13503 144 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 CNN3Q15417 329 aaKnown RBP9.1□□□□□ -0.95
USP49-204ENST00000423567 LRRC10Q5BKY1 277 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 DMRTC1Q5HYR2 192 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 ZNF691Q5VV52 312 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 TMEM42Q69YG0 159 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 RBMS3Q6XE24 437 aaKnown RBP9.1□□□□□ -0.95
USP49-204ENST00000423567 Q6ZSR3 168 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 LHFPL3Q86UP9 236 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 HAVCR2Q8TDQ0 301 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 APH1BQ8WW43 257 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 ST8SIA4Q92187 359 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 AQP3Q92482 292 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 MED30Q96HR3 178 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 MDFIQ99750 246 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 SUCNR1Q9BXA5 334 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 FGF23Q9GZV9 251 aaPredicted RBP9.1□□□□□ -0.95
USP49-204ENST00000423567 WDR13Q9H1Z4 485 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 SNTG1Q9NSN8 517 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 RASL12Q9NYN1 266 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 NLKQ9UBE8 527 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 CTSZQ9UBR2 303 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 NUP50Q9UKX7 468 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 MYRFQ9Y2G1 1151 aa9.1□□□□□ -0.95
USP49-204ENST00000423567 FAM230AA0A1W2PPH8 454 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 PQLC2LA1A4F0 135 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 OR2AT4A6NND4 320 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 C22orf46C9J442 243 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.09□□□□□ -0.95
USP49-204ENST00000423567 J3QT63 122 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 CASQ2O14958 399 aaPredicted RBP9.09□□□□□ -0.95
USP49-204ENST00000423567 RHBDL1O75783 438 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 CLIC3O95833 236 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 CCDC159P0C7I6 412 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 MYL12AP19105 171 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 DCKP27707 260 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 KIR3DL2P43630 455 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 FUT6P51993 359 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 GBX2P52951 348 aaPredicted RBP9.09□□□□□ -0.95
USP49-204ENST00000423567 IL13RA1P78552 427 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 PAX2Q02962 417 aa9.09□□□□□ -0.95
USP49-204ENST00000423567 IKZF1Q13422 519 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms