RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 NCR3LG1Q68D85 454 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 WDR88Q6ZMY6 472 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 ZNF836Q6ZNA1 936 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 LRRC74BQ6ZQY2 392 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 Q6ZR03 302 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 SLC35D2Q76EJ3 337 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 LCA5Q86VQ0 697 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 CLECL1Q8IZS7 167 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 TRIML2Q8N7C3 387 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 ANKFN1Q8N957 763 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 OR2T11Q8NH01 316 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 OR52P1PQ8NH57 321 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 OR6X1Q8NH79 312 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 AKR7LQ8NHP1 331 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 GATAD1Q8WUU5 269 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 TMEM54Q969K7 222 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 SLC25A44Q96H78 314 aaPredicted RBP3.87□□□□□ -1.79
SFXN1-202ENST00000421887 FCRL1Q96LA6 429 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 PPP3R2Q96LZ3 170 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 MS4A10Q96PG2 267 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 ZNF607Q96SK3 696 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 ZNF649Q9BS31 505 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 ABHD6Q9BV23 337 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 SLC5A7Q9GZV3 580 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 PPP1R3EQ9H7J1 279 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 ZNF702PQ9H963 129 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 SIAEQ9HAT2 523 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 CALML5Q9NZT1 146 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.87□□□□□ -1.79
SFXN1-202ENST00000421887 TMEM216Q9P0N5 145 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 CSMD3Q7Z407 3707 aa3.87□□□□□ -1.79
SFXN1-202ENST00000421887 RYR2Q92736 4967 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 OOEPA6NGQ2 149 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 F5H5P2 479 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 SLC33A1O00400 549 aaPredicted RBP3.86□□□□□ -1.79
SFXN1-202ENST00000421887 HMGN4O00479 90 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 PLPP3O14495 311 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 AZIN1O14977 448 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 SYNGR1O43759 233 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 CHST1O43916 411 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 PEX11AO75192 247 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 GLCEO94923 617 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 MMP7P09237 267 aaPredicted RBP3.86□□□□□ -1.79
SFXN1-202ENST00000421887 MYL2P10916 166 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 NR2C1P13056 603 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 PRG2P13727 222 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 RPS4Y1P22090 263 aaKnown RBP3.86□□□□□ -1.79
SFXN1-202ENST00000421887 GSK3BP49841 420 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 STX1BP61266 288 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 NCALDP61601 193 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 PSG4Q00888 419 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 PRB3Q04118 309 aaPredicted RBP3.86□□□□□ -1.79
SFXN1-202ENST00000421887 KLRD1Q13241 179 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 MAD2L1Q13257 205 aaPredicted RBP3.86□□□□□ -1.79
SFXN1-202ENST00000421887 SGCAQ16586 387 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 AANATQ16613 207 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 ANXA8L1Q5VT79 327 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 OR4F3Q6IEY1 312 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 C1orf94Q6P1W5 598 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 C8orf82Q6P1X6 216 aaPredicted RBP3.86□□□□□ -1.79
SFXN1-202ENST00000421887 HDDC2Q7Z4H3 204 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 PATL1Q86TB9 770 aaKnown RBP3.86□□□□□ -1.79
SFXN1-202ENST00000421887 SBSPONQ8IVN8 264 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 TIGD4Q8IY51 512 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 LRRC34Q8IZ02 419 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 Q8N2B8 174 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 KRTCAP2Q8N6L1 136 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 CLDN22Q8N7P3 220 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 FNDC5Q8NAU1 212 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 NHLRC2Q8NBF2 726 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 OR8G5Q8NG78 346 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 OR5L1Q8NGL2 311 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 OR5J2Q8NH18 312 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 DNAJA4Q8WW22 397 aaPredicted RBP3.86□□□□□ -1.79
SFXN1-202ENST00000421887 RORBQ92753 470 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 MCHR2Q969V1 340 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 SPSB1Q96BD6 273 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 HAVCR1Q96D42 359 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 SLC41A3Q96GZ6 507 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 CCDC115Q96NT0 180 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 ATP6V0BQ99437 205 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 SEPHS2Q99611 448 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 ERP44Q9BS26 406 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 SLC35A5Q9BS91 424 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 C1orf50Q9BV19 199 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 CDCA4Q9BXL8 241 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 GFRA4Q9GZZ7 299 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 PPIL3Q9H2H8 161 aaKnown RBP3.86□□□□□ -1.79
SFXN1-202ENST00000421887 SLC38A1Q9H2H9 487 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 RMND5AQ9H871 391 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 C12orf10Q9HB07 376 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 ABCB10Q9NRK6 738 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 UFSP2Q9NUQ7 469 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 MRPL39Q9NYK5 338 aaKnown RBP3.86□□□□□ -1.79
SFXN1-202ENST00000421887 CTSZQ9UBR2 303 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 PITPNC1Q9UKF7 332 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 SNX12Q9UMY4 172 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 UTP11Q9Y3A2 253 aaKnown RBP3.86□□□□□ -1.79
SFXN1-202ENST00000421887 TIMM10BQ9Y5J6 103 aa3.86□□□□□ -1.79
SFXN1-202ENST00000421887 GMNCA6NCL1 334 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms