RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 HIVEP2P31629 2446 aa17.31■□□□□ 0.36
HMGXB4-203ENST00000420166 DOCK11Q5JSL3 2073 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 LGALS8O00214 317 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 EGR1P18146 543 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 CD80P33681 288 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 BDH1Q02338 343 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 ZNF404Q494X3 552 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 CYB5R2Q6BCY4 276 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 C19orf18Q8NEA5 215 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 OR10Z1Q8NGY1 313 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 TRMT10AQ8TBZ6 339 aaKnown RBP17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 NPRL2Q8WTW4 380 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 MSI2Q96DH6 328 aaKnown RBP17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 CCDC90BQ9GZT6 254 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 PCDHB10Q9UN67 800 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 DHDHQ9UQ10 334 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 ZNF281Q9Y2X9 895 aa17.3■□□□□ 0.36
HMGXB4-203ENST00000420166 SONP18583 2426 aaKnown RBP17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 FAM157AC9JC47 383 aa17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 J3QT63 122 aa17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 ZNF16P17020 682 aaPredicted RBP17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 EEF1B2P24534 225 aaKnown RBP17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 ACSM1Q08AH1 577 aa17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 CNN3Q15417 329 aaKnown RBP17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 SPHARQ15513 63 aa17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 HAGHLQ6PII5 290 aaPredicted RBP17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 ZNF573Q86YE8 665 aa17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 PARP16Q8N5Y8 322 aa17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 AQP3Q92482 292 aa17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 GHSRQ92847 366 aa17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 PGLYRP3Q96LB9 341 aa17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 OR5M11Q96RB7 305 aa17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 TMEM246Q9BRR3 403 aa17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 PATZ1Q9HBE1 687 aaKnown RBP17.29■□□□□ 0.36
HMGXB4-203ENST00000420166 NSD1Q96L73 2696 aaPredicted RBP17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 IGKV1-9A0A0C4DH69 117 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 PNMA8CA0A1B0GUJ8 204 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 FAM230AA0A1W2PPH8 454 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 CEACAM18A8MTB9 384 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 SRRM5B3KS81 715 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 C3orf80F5H4A9 247 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 PLPP2O43688 288 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 RHBDL1O75783 438 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 ATF1P18846 271 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 CELP19835 753 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 HAAOP46952 286 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 SOX2P48431 317 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 FUT6P51993 359 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 GABARAPL2P60520 117 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 LINC01356Q8N9X3 169 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 DNAAF1Q8NEP3 725 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 DEFB108BQ8NET1 73 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 YTHDF1Q9BYJ9 559 aaKnown RBP17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 WNK2Q9Y3S1 2297 aa17.28■□□□□ 0.36
HMGXB4-203ENST00000420166 TRAV38-1A0A0B4J264 116 aa17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 OOEPA6NGQ2 149 aa17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 B4DSR2 109 aa17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 F5H0A9 414 aaPredicted RBP17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 CD1AP06126 327 aa17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 PRKACBP22694 351 aa17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 TEX36Q5VZQ5 186 aa17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 SFRP4Q6FHJ7 346 aaPredicted RBP17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 Q71RC1 249 aaPredicted RBP17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 SERPINA12Q8IW75 414 aa17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 OR13C5Q8NGS8 318 aa17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 OR13C9Q8NGT0 318 aa17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 ZNF671Q8TAW3 534 aa17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 SPSB1Q96BD6 273 aa17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 BORCS8Q96FH0 119 aa17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 ZCCHC4Q9H5U6 513 aa17.27■□□□□ 0.36
HMGXB4-203ENST00000420166 ARHGAP32A7KAX9 2087 aa17.27■□□□□ 0.35
HMGXB4-203ENST00000420166 IGKV1-27A0A075B6S5 117 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 TRBV5-5A0A0J9YX44 114 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 AKR7A2O43488 359 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 CD2P06729 351 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 OCM2P0CE71 109 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 MPZP25189 248 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 AZGP1P25311 298 aaKnown RBP17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 RPS11P62280 158 aaKnown RBP eCLIP17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 MED22Q15528 200 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 TBCEQ15813 527 aaPredicted RBP17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 KCNJ8Q15842 424 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 YIF1BQ5BJH7 314 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 DCDC5Q6ZRR9 648 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 FAM90A1Q86YD7 464 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 OR5D14Q8NGL3 314 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 PKIBQ9C010 78 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 MIOXQ9UGB7 285 aa17.26■□□□□ 0.35
HMGXB4-203ENST00000420166 IGHV3OR15-7A0A075B7D8 119 aa17.25■□□□□ 0.35
HMGXB4-203ENST00000420166 SYNGR1O43759 233 aa17.25■□□□□ 0.35
HMGXB4-203ENST00000420166 TGFAP01135 160 aa17.25■□□□□ 0.35
HMGXB4-203ENST00000420166 RPS2P15880 293 aaKnown RBP17.25■□□□□ 0.35
HMGXB4-203ENST00000420166 MUC1P15941 1255 aaPredicted RBP17.25■□□□□ 0.35
HMGXB4-203ENST00000420166 CPT2P23786 658 aa17.25■□□□□ 0.35
HMGXB4-203ENST00000420166 MAP2K4P45985 399 aa17.25■□□□□ 0.35
HMGXB4-203ENST00000420166 MICBQ29980 383 aa17.25■□□□□ 0.35
HMGXB4-203ENST00000420166 FAM166AQ6J272 317 aa17.25■□□□□ 0.35
HMGXB4-203ENST00000420166 ANGPTL5Q86XS5 388 aa17.25■□□□□ 0.35
HMGXB4-203ENST00000420166 CALHM1Q8IU99 346 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms