RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 PCDHB16Q9NRJ7 776 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 FBXO9Q9UK97 447 aaPredicted RBP12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 RAB22AQ9UL26 194 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 IGKV1-27A0A075B6S5 117 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 DEFB108AA8MXU0 73 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 RGS5O15539 181 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 SCGNO76038 276 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 SNRPBP14678 240 aaKnown RBP12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 COL8A1P27658 744 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 POU3F4P49335 361 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 ART1P52961 327 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 PDZK1IP1Q13113 114 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 ZNF846Q147U1 533 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 EFNB3Q15768 340 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 MSMPQ1L6U9 139 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 SLC22A25Q6T423 547 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 ZNF573Q86YE8 665 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 OR51D1Q8NGF3 324 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 KCNG3Q8TAE7 436 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 LINC01560Q8TB33 94 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 LGALS14Q8TCE9 139 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 C15orf40Q8WUR7 153 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 SLC25A38Q96DW6 304 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 PLPPR2Q96GM1 343 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 MICU1Q9BPX6 476 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 RTL8AQ9BWD3 113 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 OR51B6Q9H340 312 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 GPR160Q9UJ42 338 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 MRPS28Q9Y2Q9 187 aaKnown RBP12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 PCNX1Q96RV3 2341 aa12.16□□□□□ -0.46
SHMT1P1-201ENST00000419974 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 HPGDSO60760 199 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 LILRA1O75019 489 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 BMP4P12644 408 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 ELK1P19419 428 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 CFHR2P36980 270 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 CD200P41217 278 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 KIR2DL3P43628 341 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 FABP6P51161 128 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 PPP5CP53041 499 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 IL24Q13007 206 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 ADIPOQQ15848 244 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 SP5Q6BEB4 398 aaPredicted RBP12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 ZNF787Q6DD87 383 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 ELP2Q6IA86 826 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 FAM89BQ8N5H3 189 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 SAMD12Q8N8I0 201 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 OR5H6Q8NGV6 325 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 ZC3HAV1LQ96H79 300 aaKnown RBP12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 CEP19Q96LK0 163 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 DIRC2Q96SL1 478 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 FGF23Q9GZV9 251 aaPredicted RBP12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 OR51I2Q9H344 312 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 PPP1R3EQ9H7J1 279 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 PALMDQ9NP74 551 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 RHBDL2Q9NX52 303 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 CRIM1Q9NZV1 1036 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 ZDHHC8Q9ULC8 765 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 RNF115Q9Y4L5 304 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 V9GYH0 126 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 CACNA1DQ01668 2161 aa12.15□□□□□ -0.46
SHMT1P1-201ENST00000419974 TMEM272A0A1B0GTI8 110 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 LRP5LA4QPB2 252 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 CTDSPLO15194 276 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 SIAH2O43255 324 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 AKR7A2O43488 359 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 TIMM8AO60220 97 aaPredicted RBP12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 NOS1APO75052 506 aaPredicted RBP12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 VSIG8P0DPA2 414 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 CA6P23280 308 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 TALDO1P37837 337 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 PRSS12P56730 875 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 ALKBH6Q3KRA9 238 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 NHLRC3Q5JS37 347 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 AWAT2Q6E213 333 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 RAB12Q6IQ22 244 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 GLIPR1L1Q6UWM5 242 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 Q6ZR03 302 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 MKXQ8IYA7 352 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 PIAS4Q8N2W9 510 aaPredicted RBP12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 S100A16Q96FQ6 103 aaKnown RBP12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 DIRAS2Q96HU8 199 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 RNF170Q96K19 258 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 GPER1Q99527 375 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 SPOCK3Q9BQ16 436 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 TM2D1Q9BX74 207 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 CST11Q9H112 138 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 CXXC4Q9H2H0 198 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 C14orf119Q9NWQ9 140 aa12.14□□□□□ -0.47
SHMT1P1-201ENST00000419974 A0A0B4J203 849 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM230AA0A1W2PPH8 454 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 FABP12A6NFH5 140 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 ZNF732B4DXR9 585 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 MLNRO43193 412 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 XRCC3O43542 346 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 EIF4EP06730 217 aaKnown RBP12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 CHRM2P08172 466 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 CD55P08174 381 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 APOBEC3AP31941 199 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms