RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 DLGAP1O14490 977 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 RHBDL1O75783 438 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 SULT1C4O75897 302 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 RPP14O95059 124 aaKnown RBP13.61□□□□□ -0.23
LINC00404-201ENST00000418660 APOL3O95236 402 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 GLRA1P23415 457 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 ALDH3A2P51648 485 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 ARF6P62330 175 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 PDCD1Q15116 288 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 LRRC10Q5BKY1 277 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 DMRTC1Q5HYR2 192 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 CLVS2Q5SYC1 327 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 TMEM42Q69YG0 159 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 ANGPTL6Q8NI99 470 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 AQP3Q92482 292 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 UBE2FQ969M7 185 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 MED30Q96HR3 178 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 DUX5Q96PT3 197 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 PRDM13Q9H4Q3 707 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 NLKQ9UBE8 527 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC00404-201ENST00000418660 SLC22A13Q9Y226 551 aa13.61□□□□□ -0.23
LINC00404-201ENST00000418660 CENPVL3A0A0U1RRI6 287 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 OR2AT4A6NND4 320 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 E9PQ18 207 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 RNASE1P07998 156 aaKnown RBP13.6□□□□□ -0.23
LINC00404-201ENST00000418660 CCL1P22362 96 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 IL13RA1P78552 427 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 IKZF1Q13422 519 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 SLC25A30Q5SVS4 291 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 HAGHLQ6PII5 290 aaPredicted RBP13.6□□□□□ -0.23
LINC00404-201ENST00000418660 CATSPERDQ86XM0 798 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 CBR4Q8N4T8 237 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 RORBQ92753 470 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 SLC25A28Q96A46 364 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 TMIGD2Q96BF3 282 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 GAFA1Q96PS6 74 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 DCTN5Q9BTE1 182 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 RASL12Q9NYN1 266 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 KPTNQ9Y664 436 aa13.6□□□□□ -0.23
LINC00404-201ENST00000418660 ENTPD6O75354 484 aa13.59□□□□□ -0.23
LINC00404-201ENST00000418660 ACAA1P09110 424 aaPredicted RBP13.59□□□□□ -0.23
LINC00404-201ENST00000418660 HKR1P10072 659 aa13.59□□□□□ -0.23
LINC00404-201ENST00000418660 CFPP27918 469 aa13.59□□□□□ -0.23
LINC00404-201ENST00000418660 SNRPGP62308 76 aaKnown RBP13.59□□□□□ -0.23
LINC00404-201ENST00000418660 SLC9A3R2Q15599 337 aa13.59□□□□□ -0.23
LINC00404-201ENST00000418660 OCLNQ16625 522 aa13.59□□□□□ -0.23
LINC00404-201ENST00000418660 DGUOKQ16854 277 aa13.59□□□□□ -0.23
LINC00404-201ENST00000418660 DEFB112Q30KQ8 113 aa13.59□□□□□ -0.23
LINC00404-201ENST00000418660 ZIK1Q3SY52 487 aaPredicted RBP13.59□□□□□ -0.23
LINC00404-201ENST00000418660 CDONQ4KMG0 1287 aa13.59□□□□□ -0.23
LINC00404-201ENST00000418660 MEDAGQ5VYS4 303 aa13.59□□□□□ -0.23
LINC00404-201ENST00000418660 ZNF573Q86YE8 665 aa13.59□□□□□ -0.23
LINC00404-201ENST00000418660 C8orf46Q8TAG6 207 aa13.59□□□□□ -0.23
LINC00404-201ENST00000418660 ZDHHC16Q969W1 377 aa13.59□□□□□ -0.23
LINC00404-201ENST00000418660 GPR173Q9NS66 373 aa13.59□□□□□ -0.23
LINC00404-201ENST00000418660 IGHV1-69DA0A0B4J2H0 117 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 A0A1B0GVI7 797 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 MDFIC2A0A1B0GVS7 189 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 PQLC2LA1A4F0 135 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 SIGLEC5O15389 551 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 IGHV1-69P01742 117 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 TFF1P04155 84 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 PSG2P11465 335 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 SELLP14151 372 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 ISL1P61371 349 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 ZNF85Q03923 595 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 RUSC1-AS1Q66K80 236 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 FAM220AQ7Z4H9 259 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 CMTM4Q8IZR5 234 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 KIR3DL3Q8N743 410 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 C3orf56Q8N813 242 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 POC1AQ8NBT0 407 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 CCDC54Q8NEL0 328 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 GATAD2BQ8WXI9 593 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 H1FXQ92522 213 aaKnown RBP13.58□□□□□ -0.24
LINC00404-201ENST00000418660 LHX4Q969G2 390 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 C9orf16Q9BUW7 83 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 S100A14Q9HCY8 104 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 NOX4Q9NPH5 578 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 ONECUT1Q9UBC0 465 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 SLC25A10Q9UBX3 287 aaPredicted RBP13.58□□□□□ -0.24
LINC00404-201ENST00000418660 ZNF222Q9UK12 451 aa13.58□□□□□ -0.24
LINC00404-201ENST00000418660 IGKV1D-17A0A075B6S4 117 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 A6NIN4 97 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 J3QRE1 110 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 J3QT63 122 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 HOXA3O43365 443 aaPredicted RBP13.57□□□□□ -0.24
LINC00404-201ENST00000418660 SYT7O43581 403 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 NOS1APO75052 506 aaPredicted RBP13.57□□□□□ -0.24
LINC00404-201ENST00000418660 HAAOP46952 286 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 GABRA2P47869 451 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 CAV3P56539 151 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 ACTC1P68032 377 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 ACTA1P68133 377 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 FOXL1Q12952 345 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 ODF4Q2M2E3 257 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 TP53I3Q53FA7 332 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 AWAT1Q58HT5 328 aa13.57□□□□□ -0.24
LINC00404-201ENST00000418660 VMO1Q7Z5L0 202 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms