RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 CHCHD2Q9Y6H1 151 aaPredicted RBP10.41□□□□□ -0.74
LIMK1-202ENST00000418310 HSPB6O14558 160 aa10.41□□□□□ -0.74
LIMK1-202ENST00000418310 CYCSP99999 105 aaKnown RBP10.41□□□□□ -0.74
LIMK1-202ENST00000418310 ZNF616Q08AN1 781 aa10.41□□□□□ -0.74
LIMK1-202ENST00000418310 ENDOGQ14249 297 aaKnown RBP10.41□□□□□ -0.74
LIMK1-202ENST00000418310 TGIF1Q15583 401 aa10.41□□□□□ -0.74
LIMK1-202ENST00000418310 PIGYQ3MUY2 71 aa10.41□□□□□ -0.74
LIMK1-202ENST00000418310 PRSS54Q6PEW0 395 aa10.41□□□□□ -0.74
LIMK1-202ENST00000418310 PEG10Q86TG7 708 aaKnown RBP10.41□□□□□ -0.74
LIMK1-202ENST00000418310 STOML3Q8TAV4 291 aa10.41□□□□□ -0.74
LIMK1-202ENST00000418310 BSCL2Q96G97 398 aaPredicted RBP10.41□□□□□ -0.74
LIMK1-202ENST00000418310 RHOFQ9HBH0 211 aa10.41□□□□□ -0.74
LIMK1-202ENST00000418310 MRPS17Q9Y2R5 130 aaKnown RBP10.41□□□□□ -0.74
LIMK1-202ENST00000418310 C1QL1O75973 258 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 NAT2P11245 290 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 HLA-GP17693 338 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 RFC3P40938 356 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 PPT1P50897 306 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 SRSF4Q08170 494 aaKnown RBP10.4□□□□□ -0.74
LIMK1-202ENST00000418310 RSU1Q15404 277 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 VAX1Q5SQQ9 334 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 FAHD2BQ6P2I3 314 aaPredicted RBP10.4□□□□□ -0.74
LIMK1-202ENST00000418310 GJC3Q8NFK1 279 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 OR5T2Q8NGG2 359 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 FBXO17Q96EF6 278 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 FAHD2AQ96GK7 314 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 C2orf50Q96LR7 162 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 CMSS1Q9BQ75 279 aaKnown RBP10.4□□□□□ -0.74
LIMK1-202ENST00000418310 SLC26A1Q9H2B4 701 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 ADAMTS9Q9P2N4 1935 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 PURGQ9UJV8 347 aaKnown RBP10.4□□□□□ -0.74
LIMK1-202ENST00000418310 C3orf80F5H4A9 247 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 DHHO43323 396 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 NME2P1O60361 137 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 TRAPPC6AO75865 159 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 DHRS3O75911 302 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 MSX1P28360 303 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 FHITP49789 147 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 GRB2P62993 217 aaKnown RBP10.4□□□□□ -0.74
LIMK1-202ENST00000418310 SLC35A1P78382 337 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 ECH1Q13011 328 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 MEX3BQ6ZN04 569 aaKnown RBP10.4□□□□□ -0.74
LIMK1-202ENST00000418310 KMT5CQ86Y97 462 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 FNDC9Q8TBE3 224 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 NELFAQ9H3P2 528 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 LIME1Q9H400 295 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 RAB18Q9NP72 206 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 UQCC1Q9NVA1 299 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 FBXL17Q9UF56 701 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 OSGIN2Q9Y236 505 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 FREM1Q5H8C1 2179 aa10.4□□□□□ -0.74
LIMK1-202ENST00000418310 IGLV3-12A0A075B6K2 115 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 A0A0G2JMM0 328 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 A0A1W2PPB8 328 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 A0A1W2PRS3 328 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 PMS2P1A4D2B8 440 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 KIR3DP1A8MWS1 328 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 PATE3B3GLJ2 98 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 K7EPK0 472 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 TP53I11O14683 189 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 TBPP20226 339 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 ITGA3P26006 1051 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 FCGR2CP31995 323 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 CXCL12P48061 93 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 RSPO1Q2MKA7 263 aaPredicted RBP10.4□□□□□ -0.75
LIMK1-202ENST00000418310 CRIP3Q6Q6R5 217 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 Q7L0L9 218 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 SPAG16Q8N0X2 631 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 FAM71E2Q8N5Q1 922 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 ESX1Q8N693 406 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 SUMF1Q8NBK3 374 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 OR11L1Q8NGX0 322 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 OR6S1Q8NH40 331 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 CRLF2Q9HC73 371 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.4□□□□□ -0.75
LIMK1-202ENST00000418310 DNAJC13O75165 2243 aa10.4□□□□□ -0.75
LIMK1-202ENST00000418310 A0A0J9YW62 118 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 C9JQL5 133 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 OR5H8P0DN80 308 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 CBR1P16152 277 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 CPT2P23786 658 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 PIGPP57054 158 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 HGFACQ04756 655 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 Q6ZRG5 221 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 TDHQ8IZJ6 230 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 SLC30A7Q8NEW0 376 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 ERGIC1Q969X5 290 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 SRXN1Q9BYN0 137 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 C19orf25Q9UFG5 118 aaPredicted RBP10.39□□□□□ -0.75
LIMK1-202ENST00000418310 NPIPB13A6NJU9 1138 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 NPIPB4C9JG80 1138 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 IFNA2P01563 188 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 RPL12P30050 165 aaKnown RBP10.39□□□□□ -0.75
LIMK1-202ENST00000418310 TAS2R46P59540 309 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 PDZK1IP1Q13113 114 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 LPAL2Q16609 132 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 MST1LQ2TV78 715 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 GGNBP1Q5YKI7 109 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 SGPP2Q8IWX5 399 aa10.39□□□□□ -0.75
LIMK1-202ENST00000418310 POC1AQ8NBT0 407 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms