RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 MED6O75586 246 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 JTBO76095 146 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 APOC1P02654 83 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 OPN1LWP04000 364 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 GAPDHP04406 335 aaKnown RBP8.59□□□□□ -1.03
CD44-206ENST00000415148 HOXB5P09067 269 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 OR8U9P0C7N5 309 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 HKR1P10072 659 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 ZNF44P15621 663 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 CPT2P23786 658 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 BLVRBP30043 206 aaPredicted RBP8.59□□□□□ -1.03
CD44-206ENST00000415148 GUCA1AP43080 201 aaPredicted RBP8.59□□□□□ -1.03
CD44-206ENST00000415148 PPT1P50897 306 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 ZNF133P52736 654 aaPredicted RBP8.59□□□□□ -1.03
CD44-206ENST00000415148 COL19A1Q14993 1142 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 SWI5Q1ZZU3 235 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 NKAIN1Q4KMZ8 207 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 GJC3Q8NFK1 279 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 OR8U1Q8NH10 309 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 ISOC2Q96AB3 205 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 C14orf79Q96F83 325 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 PGAM5Q96HS1 289 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 WDR77Q9BQA1 342 aaPredicted RBP8.59□□□□□ -1.03
CD44-206ENST00000415148 PARP11Q9NR21 331 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 TUBD1Q9UJT1 453 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 MED19A0JLT2 244 aaPredicted RBP8.59□□□□□ -1.03
CD44-206ENST00000415148 E9PLN8 166 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 DHRS3O75911 302 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 CD5P06127 495 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 CYC1P08574 325 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 FCGR3AP08637 254 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 SRFP11831 508 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 S100A10P60903 97 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 CRIP3Q6Q6R5 217 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 BTNL8Q6UX41 500 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 FOXL2NBQ6ZUU3 175 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 CPEB2Q7Z5Q1 589 aaKnown RBP8.59□□□□□ -1.03
CD44-206ENST00000415148 PPP1R3BQ86XI6 285 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 FADS6Q8N9I5 356 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 SECTM1Q8WVN6 248 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 HAS2Q92819 552 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 AKR1E2Q96JD6 320 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 S100A13Q99584 98 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 SMIM3Q9BZL3 60 aa8.59□□□□□ -1.03
CD44-206ENST00000415148 CNTRLQ7Z7A1 2325 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 IGKV1D-8A0A087WSZ0 117 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 TRBV23-1A0A0A0MS06 115 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 CTSDP07339 412 aaPredicted RBP8.58□□□□□ -1.04
CD44-206ENST00000415148 PAX6P26367 422 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 RBMXP38159 391 aaKnown RBP8.58□□□□□ -1.04
CD44-206ENST00000415148 HIST1H3AP68431 136 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 FAM3AP98173 230 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 PEA15Q15121 130 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 HMGN3Q15651 99 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 IGSF11Q5DX21 431 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 C10orf128Q5T292 105 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 HIST2H3PS2Q5TEC6 136 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 FAM69BQ5VUD6 431 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 TMEM268Q5VZI3 342 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 CARD17Q5XLA6 110 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 OPN5Q6U736 354 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 HIST2H3AQ71DI3 136 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 C1QL2Q7Z5L3 287 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 SGPP2Q8IWX5 399 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 LYPD6BQ8NI32 183 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 HIST1H2BAQ96A08 127 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 LYZL4Q96KX0 146 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 IP6K3Q96PC2 410 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 RSRP1Q9BUV0 290 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 C20orf24Q9BUV8 137 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 NELFAQ9H3P2 528 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 ZNF160Q9HCG1 818 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 SDK1Q7Z5N4 2213 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 ASCC3Q8N3C0 2202 aaKnown RBP8.58□□□□□ -1.04
CD44-206ENST00000415148 A0A087WZY1 265 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 A0A1W2PNR3 127 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 SGCEO43556 437 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 DEDDO75618 318 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 ZNF205O95201 554 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 IFNA21P01568 189 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 HPNP05981 417 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 HOXB1P14653 301 aaPredicted RBP8.58□□□□□ -1.04
CD44-206ENST00000415148 MSR1P21757 451 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 RPL12P30050 165 aaKnown RBP8.58□□□□□ -1.04
CD44-206ENST00000415148 SMCO1Q147U7 214 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 FAM209BQ5JX69 171 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 SLC25A45Q8N413 288 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 COMMD1Q8N668 190 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 KDF1Q8NAX2 398 aaPredicted RBP8.58□□□□□ -1.04
CD44-206ENST00000415148 OR5D18Q8NGL1 313 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 TMEM54Q969K7 222 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 SPSB2Q99619 263 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 CHST5Q9GZS9 411 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 PLEKHA2Q9HB19 425 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 GSN-AS1Q9NRJ2 163 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 CACFD1Q9UGQ2 172 aa8.58□□□□□ -1.04
CD44-206ENST00000415148 TRAV20A0A0B4J274 112 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 A6NLC8 198 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 ZNF814B7Z6K7 855 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 STMND1H3BQB6 276 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms