RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 TEX36Q5VZQ5 186 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 LAIR2Q6ISS4 152 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 LHFPL2Q6ZUX7 228 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 SERPINA12Q8IW75 414 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 GCSAMQ8N6F7 178 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 SCCPDHQ8NBX0 429 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 OR4M2Q8NGB6 313 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 RPS4Y2Q8TD47 263 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 TMEM186Q96B77 213 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 BORCS8Q96FH0 119 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 CDCA4Q9BXL8 241 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 PKIBQ9C010 78 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 DNTTIP1Q9H147 329 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 OR51I2Q9H344 312 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 TMEM165Q9HC07 324 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 GPR173Q9NS66 373 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 OR5V1Q9UGF6 321 aa12.28□□□□□ -0.44
LIMS1-206ENST00000414829 MTORP42345 2549 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 NKX6-3A6NJ46 265 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 A8MXK9 166 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 PTGES3LE9PB15 166 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 J3QLI3 93 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 WNT9BO14905 357 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 CYB5AP00167 134 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 HAAOP46952 286 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 RBP2P50120 134 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 RIPPLY3P57055 190 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 SLC35A2P78381 396 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 SCGB2A2Q13296 93 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 SMIM21Q3B7S5 101 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 YIF1BQ5BJH7 314 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 HAGHLQ6PII5 290 aaPredicted RBP12.27□□□□□ -0.45
LIMS1-206ENST00000414829 ZNF826PQ6ZT77 177 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 SLC36A1Q7Z2H8 476 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 FAM90A1Q86YD7 464 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 RDH10Q8IZV5 341 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 BOLLQ8N9W6 283 aaKnown RBP12.27□□□□□ -0.45
LIMS1-206ENST00000414829 RPL3LQ92901 407 aaKnown RBP12.27□□□□□ -0.45
LIMS1-206ENST00000414829 TMEM246Q9BRR3 403 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 SSBP3Q9BWW4 388 aaPredicted RBP12.27□□□□□ -0.45
LIMS1-206ENST00000414829 RASL12Q9NYN1 266 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 ZNF281Q9Y2X9 895 aa12.27□□□□□ -0.45
LIMS1-206ENST00000414829 CSPG4Q6UVK1 2322 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 E9PI62 339 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 C3orf80F5H4A9 247 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 OGG1O15527 345 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 RGS10O43665 173 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 ALX3O95076 343 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 MT-ND2P03891 347 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 CD1AP06126 327 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 CRHBPP24387 322 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 MPZP25189 248 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 C21orf33P30042 268 aaPredicted RBP12.26□□□□□ -0.45
LIMS1-206ENST00000414829 CD80P33681 288 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 PITPNBP48739 271 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 ATP1B3P54709 279 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 GNB2P62879 340 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 PPP3R1P63098 170 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 IL24Q13007 206 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 Q8IYB0 196 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 PARP16Q8N5Y8 322 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 GATAD2BQ8WXI9 593 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 AQP3Q92482 292 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 FGGYQ96C11 551 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 ADAT3Q96EY9 351 aaPredicted RBP12.26□□□□□ -0.45
LIMS1-206ENST00000414829 PDCD1LG2Q9BQ51 273 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 SHARPINQ9H0F6 387 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 HIF1ANQ9NWT6 349 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 CKLFQ9UBR5 152 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 CLN8Q9UBY8 286 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 CLEC2DQ9UHP7 191 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 POLR3KQ9Y2Y1 108 aaPredicted RBP12.26□□□□□ -0.45
LIMS1-206ENST00000414829 TANC2Q9HCD6 1990 aa12.26□□□□□ -0.45
LIMS1-206ENST00000414829 FAM230AA0A1W2PPH8 454 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 FAM157AC9JC47 383 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 MAGEB3O15480 346 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 SULT1B1O43704 296 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 MRPS14O60783 128 aaKnown RBP12.25□□□□□ -0.45
LIMS1-206ENST00000414829 ACAA1P09110 424 aaPredicted RBP12.25□□□□□ -0.45
LIMS1-206ENST00000414829 WNT2P09544 360 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 ATF1P18846 271 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 GLRA1P23415 457 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 MAPK3P27361 379 aaPredicted RBP12.25□□□□□ -0.45
LIMS1-206ENST00000414829 ACSM1Q08AH1 577 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 CD276Q5ZPR3 534 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 DMKNQ6E0U4 476 aaPredicted RBP12.25□□□□□ -0.45
LIMS1-206ENST00000414829 FIP1L1Q6UN15 594 aaKnown RBP12.25□□□□□ -0.45
LIMS1-206ENST00000414829 Q71RC1 249 aaPredicted RBP12.25□□□□□ -0.45
LIMS1-206ENST00000414829 PRSS48Q7RTY5 328 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 C11orf53Q8IXP5 236 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 NANOGP1Q8N7R0 232 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 POC1AQ8NBT0 407 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 ZNF485Q8NCK3 441 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 DEFB108BQ8NET1 73 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 TMIGD2Q96BF3 282 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 OPALINQ96PE5 141 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 FGF23Q9GZV9 251 aaPredicted RBP12.25□□□□□ -0.45
LIMS1-206ENST00000414829 DUSP21Q9H596 190 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 ZCCHC4Q9H5U6 513 aa12.25□□□□□ -0.45
LIMS1-206ENST00000414829 PPP1R3EQ9H7J1 279 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms