RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ABHD1Q96SE0 405 aa4.12□□□□□ -1.75
VPS41-205ENST00000414632 SRSF8Q9BRL6 282 aaKnown RBP4.12□□□□□ -1.75
VPS41-205ENST00000414632 ABHD6Q9BV23 337 aa4.12□□□□□ -1.75
VPS41-205ENST00000414632 OSBPL10Q9BXB5 764 aa4.12□□□□□ -1.75
VPS41-205ENST00000414632 BPESC1Q9GZL8 116 aa4.12□□□□□ -1.75
VPS41-205ENST00000414632 S100A14Q9HCY8 104 aa4.12□□□□□ -1.75
VPS41-205ENST00000414632 ZNF275Q9NSD4 429 aaPredicted RBP4.12□□□□□ -1.75
VPS41-205ENST00000414632 DECR2Q9NUI1 292 aa4.12□□□□□ -1.75
VPS41-205ENST00000414632 DCAF16Q9NXF7 216 aa4.12□□□□□ -1.75
VPS41-205ENST00000414632 SLCO1C1Q9NYB5 712 aa4.12□□□□□ -1.75
VPS41-205ENST00000414632 PURGQ9UJV8 347 aaKnown RBP4.12□□□□□ -1.75
VPS41-205ENST00000414632 LSM4Q9Y4Z0 139 aaKnown RBP4.12□□□□□ -1.75
VPS41-205ENST00000414632 MXRA5Q9NR99 2828 aa4.12□□□□□ -1.75
VPS41-205ENST00000414632 ARHGAP32A7KAX9 2087 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 A0A096LNT2 108 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 LOC390937A0A1W2PQ73 354 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 CCDC182A6NF36 153 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 PRR32B1ATL7 298 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 ZNF878C9JN71 531 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 MGST3O14880 152 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 MAGEB4O15481 346 aaPredicted RBP4.11□□□□□ -1.75
VPS41-205ENST00000414632 MLNRO43193 412 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 PPIHO43447 177 aaKnown RBP4.11□□□□□ -1.75
VPS41-205ENST00000414632 HLA-DPB1P04440 258 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 LYNP07948 512 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 CSF3P09919 207 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 H2BFMP0C1H6 154 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 SLC25A16P16260 332 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 USF1P22415 310 aaPredicted RBP4.11□□□□□ -1.75
VPS41-205ENST00000414632 HSD11B1P28845 292 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 NR4A2P43354 598 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 SLC15A1P46059 708 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 GPR6P46095 362 aaPredicted RBP4.11□□□□□ -1.75
VPS41-205ENST00000414632 CAMPP49913 170 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 MMP15P51511 669 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 PPP5CP53041 499 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 ZNF121P58317 390 aaPredicted RBP4.11□□□□□ -1.75
VPS41-205ENST00000414632 DSCR9P59020 149 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 ESRRGP62508 458 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 TNFAIP6P98066 277 aaPredicted RBP4.11□□□□□ -1.75
VPS41-205ENST00000414632 ZNF92Q03936 586 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 ECH1Q13011 328 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 GK2Q14410 553 aaPredicted RBP4.11□□□□□ -1.75
VPS41-205ENST00000414632 TMEM249Q2WGJ8 235 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 KRTAP27-1Q3LI81 207 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 CXorf66Q5JRM2 361 aaPredicted RBP4.11□□□□□ -1.75
VPS41-205ENST00000414632 C12orf73Q69YU5 71 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 ZFP1Q6P2D0 407 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 UNQ6126/PRO20091Q6UXV3 157 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 PLEKHG7Q6ZR37 379 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 IL17RELQ6ZVW7 336 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 FAM57BQ71RH2 274 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 TIGD4Q8IY51 512 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 ZNF786Q8N393 782 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 PARP8Q8N3A8 854 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 CBR4Q8N4T8 237 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 OR51G2Q8NGK0 314 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 FAM81AQ8TBF8 368 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 TMEM163Q8TC26 289 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 ITLN1Q8WWA0 313 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 DNAJC9Q8WXX5 260 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 CCL17Q92583 94 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 APOBEC3DQ96AK3 386 aaPredicted RBP4.11□□□□□ -1.75
VPS41-205ENST00000414632 ELMOD3Q96FG2 381 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 TBX5Q99593 518 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 SLC29A1Q99808 456 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 RBM4BQ9BQ04 359 aaKnown RBP4.11□□□□□ -1.75
VPS41-205ENST00000414632 WACQ9BTA9 647 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 C1QTNF5Q9BXJ0 243 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 PPP1R3EQ9H7J1 279 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 MARCH7Q9H992 704 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 LPAR2Q9HBW0 351 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 RANGRFQ9HD47 186 aaPredicted RBP4.11□□□□□ -1.75
VPS41-205ENST00000414632 YAE1D1Q9NRH1 226 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 DDX28Q9NUL7 540 aaKnown RBP4.11□□□□□ -1.75
VPS41-205ENST00000414632 ZNF319Q9P2F9 582 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 LAMP5Q9UJQ1 280 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 COPS3Q9UNS2 423 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 ORC6Q9Y5N6 252 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 ABCA1O95477 2261 aa4.11□□□□□ -1.75
VPS41-205ENST00000414632 FN1P02751 2386 aaKnown RBP4.1□□□□□ -1.75
VPS41-205ENST00000414632 SONP18583 2426 aaKnown RBP4.1□□□□□ -1.75
VPS41-205ENST00000414632 IGHV1-69-2A0A0G2JMI3 117 aa4.1□□□□□ -1.75
VPS41-205ENST00000414632 ISPDA4D126 451 aa4.1□□□□□ -1.75
VPS41-205ENST00000414632 GGT3PA6NGU5 568 aa4.1□□□□□ -1.75
VPS41-205ENST00000414632 F5H5P2 479 aa4.1□□□□□ -1.75
VPS41-205ENST00000414632 H3BSH0 61 aa4.1□□□□□ -1.75
VPS41-205ENST00000414632 NDUFS8O00217 210 aa4.1□□□□□ -1.75
VPS41-205ENST00000414632 RP2O75695 350 aa4.1□□□□□ -1.75
VPS41-205ENST00000414632 CYB5R3P00387 301 aaPredicted RBP4.1□□□□□ -1.75
VPS41-205ENST00000414632 ALPLP05186 524 aa4.1□□□□□ -1.75
VPS41-205ENST00000414632 HOXB5P09067 269 aa4.1□□□□□ -1.75
VPS41-205ENST00000414632 NHLRC4P0CG21 123 aaPredicted RBP4.1□□□□□ -1.75
VPS41-205ENST00000414632 IGHV4-31P0DP07 118 aa4.1□□□□□ -1.75
VPS41-205ENST00000414632 TMEM11P17152 192 aa4.1□□□□□ -1.75
VPS41-205ENST00000414632 KITLGP21583 273 aa4.1□□□□□ -1.75
VPS41-205ENST00000414632 ACHEP22303 614 aa4.1□□□□□ -1.75
VPS41-205ENST00000414632 CA6P23280 308 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms