RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 FLRT3Q9NZU0 649 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 A0A1W2PR80 420 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 MT-ND4LP03901 98 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 HIST1H1DP16402 221 aaKnown RBP15.35■□□□□ 0.05
PHRF1-202ENST00000413872 LRRC29Q8WV35 223 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 ACTR3CQ9C0K3 210 aaPredicted RBP15.35■□□□□ 0.05
PHRF1-202ENST00000413872 PILRBQ9UKJ0 227 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 OR5H14A6NHG9 310 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 CDC42EP2O14613 210 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 SSSCA1O60232 199 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 PDCD6O75340 191 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 FGF5P12034 268 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 RPL12P30050 165 aaKnown RBP15.35■□□□□ 0.05
PHRF1-202ENST00000413872 PXDC1Q5TGL8 231 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 PINX1Q96BK5 328 aaKnown RBP15.35■□□□□ 0.05
PHRF1-202ENST00000413872 AMMECR1Q9Y4X0 333 aaPredicted RBP15.35■□□□□ 0.05
PHRF1-202ENST00000413872 ERGP11308 486 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 TGM1P22735 817 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 DCTDP32321 178 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 UBE2G2P60604 165 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 LYPD8Q6UX82 237 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 SLC22A18ASQ8N1D0 253 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 KDF1Q8NAX2 398 aaPredicted RBP15.35■□□□□ 0.05
PHRF1-202ENST00000413872 PTDSS2Q9BVG9 487 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 SRRQ9GZT4 340 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 PIGMQ9H3S5 423 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 PSENENQ9NZ42 101 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 EPOPA6NHQ4 379 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 CEACAM3P40198 252 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 RPS10P46783 165 aaKnown RBP15.35■□□□□ 0.05
PHRF1-202ENST00000413872 LILRB4Q8NHJ6 448 aa15.35■□□□□ 0.05
PHRF1-202ENST00000413872 C9orf40Q8IXQ3 194 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 KCNRGQ8N5I3 272 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 LIN37Q96GY3 246 aaPredicted RBP15.34■□□□□ 0.05
PHRF1-202ENST00000413872 GMPPAQ96IJ6 420 aaPredicted RBP15.34■□□□□ 0.05
PHRF1-202ENST00000413872 TMEM56Q96MV1 263 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 OR6C3Q9NZP0 311 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 CROCCQ5TZA2 2017 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 WISP3O95389 354 aaPredicted RBP15.34■□□□□ 0.05
PHRF1-202ENST00000413872 COX5AP20674 150 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 FPR2P25090 351 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 BMI1P35226 326 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 MESP2Q0VG99 397 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 ZDHHC22Q8N966 263 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 RPEQ96AT9 228 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 TCEAL7Q9BRU2 100 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 ONECUT1Q9UBC0 465 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 TRAV38-1A0A0B4J264 116 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 ZNF705FA8MVS1 300 aaPredicted RBP15.34■□□□□ 0.05
PHRF1-202ENST00000413872 ZNF705DP0CH99 300 aaPredicted RBP15.34■□□□□ 0.05
PHRF1-202ENST00000413872 ZNF705BP0CI00 300 aaPredicted RBP15.34■□□□□ 0.05
PHRF1-202ENST00000413872 SNRPNP63162 240 aaKnown RBP15.34■□□□□ 0.05
PHRF1-202ENST00000413872 TUSC5Q8IXB3 177 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 ZNF721Q8TF20 911 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 M0R1X1 148 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 OR5G3P0C626 314 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 SP9P0CG40 484 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 PI3P19957 117 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 CXorf67Q86X51 503 aaPredicted RBP15.34■□□□□ 0.05
PHRF1-202ENST00000413872 ZNF485Q8NCK3 441 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 CCL17Q92583 94 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 NRTNQ99748 197 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 NDFIP1Q9BT67 221 aa15.34■□□□□ 0.05
PHRF1-202ENST00000413872 IFI6P09912 130 aa15.33■□□□□ 0.05
PHRF1-202ENST00000413872 MGST1P10620 155 aaKnown RBP15.33■□□□□ 0.05
PHRF1-202ENST00000413872 PRRX1P54821 245 aa15.33■□□□□ 0.05
PHRF1-202ENST00000413872 FYTTD1Q96QD9 318 aaKnown RBP15.33■□□□□ 0.05
PHRF1-202ENST00000413872 CES1P1Q9UKY3 287 aa15.33■□□□□ 0.05
PHRF1-202ENST00000413872 DOCK5Q9H7D0 1870 aa15.33■□□□□ 0.05
PHRF1-202ENST00000413872 ZFP92A6NM28 416 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 SULT1A3P0DMM9 295 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 SULT1A4P0DMN0 295 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 CDC20Q12834 499 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 MAMSTRQ6ZN01 415 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 PCNPQ8WW12 178 aaKnown RBP15.33■□□□□ 0.04
PHRF1-202ENST00000413872 TMEM230Q96A57 120 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 AK3Q9UIJ7 227 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 INO80CQ6PI98 192 aaPredicted RBP15.33■□□□□ 0.04
PHRF1-202ENST00000413872 SAP25Q8TEE9 199 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 PRSS23O95084 383 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 IL5P05113 134 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 CRYBA1P05813 215 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 KIR2DS2P43631 304 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 FAM219BQ5XKK7 198 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 C1orf174Q8IYL3 243 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 SOX7Q9BT81 388 aa15.33■□□□□ 0.04
PHRF1-202ENST00000413872 PRSS44E7EML9 344 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 CDX4O14627 284 aaPredicted RBP15.32■□□□□ 0.04
PHRF1-202ENST00000413872 FLI1Q01543 452 aaPredicted RBP15.32■□□□□ 0.04
PHRF1-202ENST00000413872 NTMQ9P121 344 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 BAMBIQ13145 260 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 AARDQ4LEZ3 155 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 OR8D4Q8NGM9 314 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 OR8U1Q8NH10 309 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 KPTNQ9Y664 436 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 AQP7O14520 342 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 TGFBR1P36897 503 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 KRTCAP3Q53RY4 240 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 C17orf107Q6ZR85 190 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 ERGIC1Q969X5 290 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms