RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 ZNF91Q05481 1191 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 LRRC36Q1X8D7 754 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 CDONQ4KMG0 1287 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 STUMQ69YW2 141 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 HAGHLQ6PII5 290 aaPredicted RBP12.28□□□□□ -0.44
LIMS4-201ENST00000413601 USP43Q70EL4 1123 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 BTN2A1Q7KYR7 527 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 SLC36A1Q7Z2H8 476 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 BCL6BQ8N143 479 aaPredicted RBP12.28□□□□□ -0.44
LIMS4-201ENST00000413601 AQP3Q92482 292 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 UPRTQ96BW1 309 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 C12orf43Q96C57 262 aaKnown RBP12.28□□□□□ -0.44
LIMS4-201ENST00000413601 LGALS12Q96DT0 336 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 AMBNQ9NP70 447 aa12.28□□□□□ -0.44
LIMS4-201ENST00000413601 TRAV40A0A0B4J280 105 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 DHRS7CA6NNS2 312 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 ANKRD65E5RJM6 399 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 SLC16A6O15403 523 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 DBTP11182 482 aaKnown RBP12.27□□□□□ -0.45
LIMS4-201ENST00000413601 SELLP14151 372 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 GLRA1P23415 457 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 TGM4P49221 684 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 IKZF1Q13422 519 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 ATPAF1Q5TC12 328 aaPredicted RBP12.27□□□□□ -0.45
LIMS4-201ENST00000413601 KCTD20Q7Z5Y7 419 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 LHFPL3Q86UP9 236 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 RDH10Q8IZV5 341 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 ACBD7Q8N6N7 88 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 ZNF555Q8NEP9 628 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 OR2G2Q8NGZ5 317 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 ZNF671Q8TAW3 534 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 Q96MT0 163 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 ADI1Q9BV57 179 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 PLEKHA1Q9HB21 404 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 SMPD3Q9NY59 655 aaPredicted RBP12.27□□□□□ -0.45
LIMS4-201ENST00000413601 MYRFQ9Y2G1 1151 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 PCDHGB1Q9Y5G3 927 aa12.27□□□□□ -0.45
LIMS4-201ENST00000413601 SOX21Q9Y651 276 aaPredicted RBP12.27□□□□□ -0.45
LIMS4-201ENST00000413601 LOC107986453A0A1B0GWG9 222 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 PQLC2LA1A4F0 135 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 ANKRD61A6NGH8 418 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 OR2AT4A6NND4 320 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 ZNF879B4DU55 563 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 J3QLW9 94 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 NDUFB3O43676 98 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 SYNGR1O43759 233 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 ECDO95905 644 aaPredicted RBP12.26□□□□□ -0.45
LIMS4-201ENST00000413601 LIPFP07098 398 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 SFTPBP07988 381 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 ZNF19P17023 458 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 HAAOP46952 286 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 RCN1Q15293 331 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 LPCAT4Q643R3 524 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 SIGLECL1Q8N7X8 197 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.26□□□□□ -0.45
LIMS4-201ENST00000413601 PNLDC1Q8NA58 520 aaKnown RBP12.26□□□□□ -0.45
LIMS4-201ENST00000413601 ANGPTL6Q8NI99 470 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 TRMT10AQ8TBZ6 339 aaKnown RBP12.26□□□□□ -0.45
LIMS4-201ENST00000413601 TMIGD2Q96BF3 282 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 C4orf36Q96KX1 117 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 ZNF488Q96MN9 340 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 JMJD8Q96S16 334 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 PCGF1Q9BSM1 259 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 MS4A7Q9GZW8 240 aaPredicted RBP12.26□□□□□ -0.45
LIMS4-201ENST00000413601 ESM1Q9NQ30 184 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 FRRS1LQ9P0K9 344 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 NLKQ9UBE8 527 aa12.26□□□□□ -0.45
LIMS4-201ENST00000413601 IGKV1D-17A0A075B6S4 117 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 NKX6-3A6NJ46 265 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 TOX4O94842 621 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 PLATP00750 562 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 UBCP0CG48 685 aaKnown RBP12.25□□□□□ -0.45
LIMS4-201ENST00000413601 NANOS3P60323 173 aaKnown RBP12.25□□□□□ -0.45
LIMS4-201ENST00000413601 UBE2V2Q15819 145 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 TUSC1Q2TAM9 212 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 LRRC10Q5BKY1 277 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 FDX2Q6P4F2 183 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 ZNF788Q6ZQV5 615 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 ANGPTL5Q86XS5 388 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 ZNF573Q86YE8 665 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 ZDHHC22Q8N966 263 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 NPRL2Q8WTW4 380 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 APH1BQ8WW43 257 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 PELI1Q96FA3 418 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 RDH12Q96NR8 316 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 GAFA1Q96PS6 74 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 DNTTIP1Q9H147 329 aa12.25□□□□□ -0.45
LIMS4-201ENST00000413601 RPUSD1Q9UJJ7 312 aaKnown RBP12.25□□□□□ -0.45
LIMS4-201ENST00000413601 FAM230AA0A1W2PPH8 454 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 TRIM77I1YAP6 450 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 J3QT63 122 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 WBP4O75554 376 aaKnown RBP12.24□□□□□ -0.45
LIMS4-201ENST00000413601 CLIC3O95833 236 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 FADS2O95864 444 aaKnown RBP12.24□□□□□ -0.45
LIMS4-201ENST00000413601 IGHA1P01876 353 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 HTR1AP08908 422 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 ACAA1P09110 424 aaPredicted RBP12.24□□□□□ -0.45
LIMS4-201ENST00000413601 PSG2P11465 335 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 MMP9P14780 707 aa12.24□□□□□ -0.45
LIMS4-201ENST00000413601 PEX2P28328 305 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms