RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 PCDHGB1Q9Y5G3 927 aa15.64■□□□□ 0.09
TRIM56-202ENST00000412507 A0A0A6YYJ9 748 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 ENSAO43768 121 aaKnown RBP15.63■□□□□ 0.09
TRIM56-202ENST00000412507 TFF1P04155 84 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 AMY2BP19961 511 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 GLRA1P23415 457 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 CD276Q5ZPR3 534 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 STUMQ69YW2 141 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 HAGHLQ6PII5 290 aaPredicted RBP15.63■□□□□ 0.09
TRIM56-202ENST00000412507 LHFPL3Q86UP9 236 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 FAM216BQ8N7L0 139 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 ST8SIA4Q92187 359 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 AQP3Q92482 292 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 C12orf43Q96C57 262 aaKnown RBP15.63■□□□□ 0.09
TRIM56-202ENST00000412507 RDH12Q96NR8 316 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 ADI1Q9BV57 179 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 C19orf24Q9BVV8 132 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 NUP50Q9UKX7 468 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 MYRFQ9Y2G1 1151 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 DSCAML1Q8TD84 2053 aa15.63■□□□□ 0.09
TRIM56-202ENST00000412507 LOC107986453A0A1B0GWG9 222 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 DHRS7CA6NNS2 312 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 H0YHG0 523 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 PPIAL4GP0DN37 164 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 FPR2P25090 351 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 BTN2A1Q7KYR7 527 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 SLC36A1Q7Z2H8 476 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 KCTD20Q7Z5Y7 419 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 RDH10Q8IZV5 341 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 OR2G2Q8NGZ5 317 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 ZNF671Q8TAW3 534 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 APH1BQ8WW43 257 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 UPRTQ96BW1 309 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 SUCNR1Q9BXA5 334 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 PLEKHA1Q9HB21 404 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 ZNF69Q9UC07 566 aa15.62■□□□□ 0.09
TRIM56-202ENST00000412507 IGHV3OR16-10A0A075B7F0 116 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 ANKRD61A6NGH8 418 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 J3QLW9 94 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 HTR1AP08908 422 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 IGHV4-38-2P0DP08 117 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 ZNF19P17023 458 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 PEX2P28328 305 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 HAAOP46952 286 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 NANOS3P60323 173 aaKnown RBP15.61■□□□□ 0.09
TRIM56-202ENST00000412507 FGF12P61328 243 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 IKZF1Q13422 519 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 ATPAF1Q5TC12 328 aaPredicted RBP15.61■□□□□ 0.09
TRIM56-202ENST00000412507 USP43Q70EL4 1123 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 C4orf36Q96KX1 117 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 FRRS1LQ9P0K9 344 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 NLKQ9UBE8 527 aa15.61■□□□□ 0.09
TRIM56-202ENST00000412507 TRAV40A0A0B4J280 105 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 PQLC2LA1A4F0 135 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 NDUFB3O43676 98 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 SYNGR1O43759 233 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 WBP4O75554 376 aaKnown RBP15.6■□□□□ 0.09
TRIM56-202ENST00000412507 CLIC3O95833 236 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 UBCP0CG48 685 aaKnown RBP15.6■□□□□ 0.09
TRIM56-202ENST00000412507 SELLP14151 372 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 TGM4P49221 684 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 HILS1P60008 231 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 ACTA2P62736 377 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 ACTG2P63267 376 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 RAB40BQ12829 278 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 SMN1Q16637 294 aaKnown RBP15.6■□□□□ 0.09
TRIM56-202ENST00000412507 FDX2Q6P4F2 183 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 ZNF788Q6ZQV5 615 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 ZNF573Q86YE8 665 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 BCL6BQ8N143 479 aaPredicted RBP15.6■□□□□ 0.09
TRIM56-202ENST00000412507 CCDC54Q8NEL0 328 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 ANGPTL6Q8NI99 470 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 TRMT10AQ8TBZ6 339 aaKnown RBP15.6■□□□□ 0.09
TRIM56-202ENST00000412507 NPRL2Q8WTW4 380 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 CYGBQ8WWM9 190 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 TMIGD2Q96BF3 282 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 PELI1Q96FA3 418 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 ZNF488Q96MN9 340 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 GAFA1Q96PS6 74 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 ALG8Q9BVK2 526 aa15.6■□□□□ 0.09
TRIM56-202ENST00000412507 RPL36Q9Y3U8 105 aaKnown RBP15.6■□□□□ 0.09
TRIM56-202ENST00000412507 NKX6-3A6NJ46 265 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 OR2AT4A6NND4 320 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 ZNF879B4DU55 563 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 J3QT63 122 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 FADS2O95864 444 aaKnown RBP15.59■□□□□ 0.09
TRIM56-202ENST00000412507 ECDO95905 644 aaPredicted RBP15.59■□□□□ 0.09
TRIM56-202ENST00000412507 IGHA1P01876 353 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 LIPFP07098 398 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 GABRA2P47869 451 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 GALEQ14376 348 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 UBE2V2Q15819 145 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 ZNF691Q5VV52 312 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 TMEM244Q5VVB8 128 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 PACRGLQ8N7B6 248 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 PNLDC1Q8NA58 520 aaKnown RBP15.59■□□□□ 0.09
TRIM56-202ENST00000412507 OR52I1Q8NGK6 324 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 MRPL48Q96GC5 212 aaKnown RBP15.59■□□□□ 0.09
TRIM56-202ENST00000412507 ZNF649Q9BS31 505 aa15.59■□□□□ 0.09
TRIM56-202ENST00000412507 PCGF1Q9BSM1 259 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms