RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 FCN3O75636 299 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 CDK1P06493 297 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 CCDC159P0C7I6 412 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 AMY2BP19961 511 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 CPT2P23786 658 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 SLC35A2P78381 396 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 CCDC58Q4VC31 144 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 RNLSQ5VYX0 342 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 SFRP4Q6FHJ7 346 aaPredicted RBP10.99□□□□□ -0.65
HDAC8-210ENST00000412342 RPL22L1Q6P5R6 122 aaKnown RBP10.99□□□□□ -0.65
HDAC8-210ENST00000412342 TMPRSS11AQ6ZMR5 421 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 ZNF841Q6ZN19 808 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 KCTD8Q6ZWB6 473 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 ZNF676Q8N7Q3 588 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 DEFB108BQ8NET1 73 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 AQP3Q92482 292 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 DACT3Q96B18 629 aaPredicted RBP10.99□□□□□ -0.65
HDAC8-210ENST00000412342 SEH1LQ96EE3 360 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 WDR13Q9H1Z4 485 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 PLEKHA1Q9HB21 404 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 HIF1ANQ9NWT6 349 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 BABAM2Q9NXR7 383 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 ERVK-18Q9QC07 812 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 RAB26Q9ULW5 256 aa10.99□□□□□ -0.65
HDAC8-210ENST00000412342 CUBNO60494 3623 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 DOCK11Q5JSL3 2073 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 IGKV1-27A0A075B6S5 117 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 IGHV3OR15-7A0A075B7D8 119 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 TRAV38-1A0A0B4J264 116 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 TRAV20A0A0B4J274 112 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 TRBV2A0A0J9YWF9 115 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 RPS2P15880 293 aaKnown RBP10.98□□□□□ -0.65
HDAC8-210ENST00000412342 MPZP25189 248 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 PAX2Q02962 417 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 DMKNQ6E0U4 476 aaPredicted RBP10.98□□□□□ -0.65
HDAC8-210ENST00000412342 ASPHD2Q6ICH7 369 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 HAGHLQ6PII5 290 aaPredicted RBP10.98□□□□□ -0.65
HDAC8-210ENST00000412342 CRIP3Q6Q6R5 217 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 UTS2BQ765I0 119 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 GLCCI1Q86VQ1 547 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 CALHM1Q8IU99 346 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 STX19Q8N4C7 294 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 NANOGP1Q8N7R0 232 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 BOLLQ8N9W6 283 aaKnown RBP10.98□□□□□ -0.65
HDAC8-210ENST00000412342 OR5AK2Q8NH90 309 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 GATAD2BQ8WXI9 593 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 PP6455Q8WZ26 134 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 FGGYQ96C11 551 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 NEIL1Q96FI4 390 aaPredicted RBP10.98□□□□□ -0.65
HDAC8-210ENST00000412342 DUSP21Q9H596 190 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 MIOXQ9UGB7 285 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 PCDHB10Q9UN67 800 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 LRCH1Q9Y2L9 728 aa10.98□□□□□ -0.65
HDAC8-210ENST00000412342 PPIAL4CA0A0B4J2A2 164 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 TRAPPC2LH3BP13 241 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 J3QT63 122 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 AKR7A2O43488 359 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 SYNGR1O43759 233 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 FOXH1O75593 365 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 GATBO75879 557 aaKnown RBP10.97□□□□□ -0.65
HDAC8-210ENST00000412342 MUC1P15941 1255 aaPredicted RBP10.97□□□□□ -0.65
HDAC8-210ENST00000412342 RIPPLY3P57055 190 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 LCN2P80188 198 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 MED21Q13503 144 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 IRF3Q14653 427 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 CR1LQ2VPA4 569 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 FAM120AOSQ5T036 256 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 STUMQ69YW2 141 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 ZNF573Q86YE8 665 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 PIP4P2Q8N4L2 257 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 PARP16Q8N5Y8 322 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 OR13C3Q8NGS6 347 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 C12orf43Q96C57 262 aaKnown RBP10.97□□□□□ -0.65
HDAC8-210ENST00000412342 SMIM19Q96E16 107 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 POM121Q96HA1 1249 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 PGLYRP3Q96LB9 341 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 TECTBQ96PL2 329 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 CDCA4Q9BXL8 241 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 SMURF1Q9HCE7 757 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 TRIM36Q9NQ86 728 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 MMP26Q9NRE1 261 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 KAAG1Q9UBP8 84 aa10.97□□□□□ -0.65
HDAC8-210ENST00000412342 LSM2Q9Y333 95 aaKnown RBP10.97□□□□□ -0.65
HDAC8-210ENST00000412342 WNK2Q9Y3S1 2297 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 A0A1B0GW55 424 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 PHF1O43189 567 aaPredicted RBP10.96□□□□□ -0.65
HDAC8-210ENST00000412342 NDUFA2O43678 99 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 NOS1APO75052 506 aaPredicted RBP10.96□□□□□ -0.65
HDAC8-210ENST00000412342 AVPP01185 164 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 GYPAP02724 150 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 RPSAP08865 295 aaKnown RBP10.96□□□□□ -0.65
HDAC8-210ENST00000412342 DUX4L2P0CJ85 424 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 DUX4L3P0CJ86 424 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 DUX4L4P0CJ87 422 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 DUX4L5P0CJ88 424 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 DUX4L6P0CJ89 424 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 DUX4L7P0CJ90 424 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 PGA5P0DJD9 388 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 ATF1P18846 271 aa10.96□□□□□ -0.65
HDAC8-210ENST00000412342 CRHBPP24387 322 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms