RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 EBAG9O00559 213 aa15.73■□□□□ 0.11
SF3A1-202ENST00000411423 SYNGR1O43759 233 aa15.73■□□□□ 0.11
SF3A1-202ENST00000411423 NRASP01111 189 aa15.73■□□□□ 0.11
SF3A1-202ENST00000411423 KRT8P05787 483 aa15.73■□□□□ 0.11
SF3A1-202ENST00000411423 KIR3DL2P43630 455 aa15.73■□□□□ 0.11
SF3A1-202ENST00000411423 DLX1P56177 255 aa15.73■□□□□ 0.11
SF3A1-202ENST00000411423 ARF6P62330 175 aa15.73■□□□□ 0.11
SF3A1-202ENST00000411423 ACTG1P63261 375 aa15.73■□□□□ 0.11
SF3A1-202ENST00000411423 TP53I3Q53FA7 332 aa15.73■□□□□ 0.11
SF3A1-202ENST00000411423 HAGHLQ6PII5 290 aaPredicted RBP15.73■□□□□ 0.11
SF3A1-202ENST00000411423 WDFY2Q96P53 400 aa15.73■□□□□ 0.11
SF3A1-202ENST00000411423 HIST1H2AAQ96QV6 131 aa15.73■□□□□ 0.11
SF3A1-202ENST00000411423 ACOXLQ9NUZ1 547 aa15.73■□□□□ 0.11
SF3A1-202ENST00000411423 IGKV1D-17A0A075B6S4 117 aa15.72■□□□□ 0.11
SF3A1-202ENST00000411423 CENPVL3A0A0U1RRI6 287 aa15.72■□□□□ 0.11
SF3A1-202ENST00000411423 OR5B21A6NL26 309 aa15.72■□□□□ 0.11
SF3A1-202ENST00000411423 TOX4O94842 621 aa15.72■□□□□ 0.11
SF3A1-202ENST00000411423 SNRPGP62308 76 aaKnown RBP15.72■□□□□ 0.11
SF3A1-202ENST00000411423 PRB3Q04118 309 aaPredicted RBP15.72■□□□□ 0.11
SF3A1-202ENST00000411423 TMED1Q13445 227 aa15.72■□□□□ 0.11
SF3A1-202ENST00000411423 DEFB112Q30KQ8 113 aa15.72■□□□□ 0.11
SF3A1-202ENST00000411423 SLC25A30Q5SVS4 291 aa15.72■□□□□ 0.11
SF3A1-202ENST00000411423 BATF2Q8N1L9 274 aa15.72■□□□□ 0.11
SF3A1-202ENST00000411423 TRUB1Q8WWH5 349 aaKnown RBP15.72■□□□□ 0.11
SF3A1-202ENST00000411423 ELL3Q9HB65 397 aaPredicted RBP15.72■□□□□ 0.11
SF3A1-202ENST00000411423 IMPAD1Q9NX62 359 aa15.72■□□□□ 0.11
SF3A1-202ENST00000411423 NLKQ9UBE8 527 aa15.72■□□□□ 0.11
SF3A1-202ENST00000411423 DNAJB11Q9UBS4 358 aa15.72■□□□□ 0.11
SF3A1-202ENST00000411423 ZNF222Q9UK12 451 aa15.72■□□□□ 0.11
SF3A1-202ENST00000411423 PQLC2LA1A4F0 135 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 MTRF1O75570 445 aaKnown RBP15.71■□□□□ 0.11
SF3A1-202ENST00000411423 SULT1C4O75897 302 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 PSG2P11465 335 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 GLRA1P23415 457 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 BAMBIQ13145 260 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 SLC9A3R2Q15599 337 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 OCLNQ16625 522 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 CLVS2Q5SYC1 327 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 SLC36A1Q7Z2H8 476 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 ENTHD1Q8IYW4 607 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 RDH10Q8IZV5 341 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 PQLC1Q8N2U9 271 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 PNLDC1Q8NA58 520 aaKnown RBP15.71■□□□□ 0.11
SF3A1-202ENST00000411423 RFKQ969G6 155 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 ITFG2Q969R8 447 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 RNFT2Q96EX2 444 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 DCTN5Q9BTE1 182 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 MAB21L2Q9Y586 359 aa15.71■□□□□ 0.11
SF3A1-202ENST00000411423 OR2AT4A6NND4 320 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 DLGAP1O14490 977 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 SIGLEC5O15389 551 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 LIPFP07098 398 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 PRTN3P24158 256 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 ATP6V1E1P36543 226 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 MTNR1AP48039 350 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 COMPP49747 757 aaPredicted RBP15.7■□□□□ 0.1
SF3A1-202ENST00000411423 CALHM1Q8IU99 346 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 Q8N7P7 452 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 POC1AQ8NBT0 407 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 LHX4Q969G2 390 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 CNTD2Q9H8S5 307 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 GNG8Q9UK08 70 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 ORC6Q9Y5N6 252 aa15.7■□□□□ 0.1
SF3A1-202ENST00000411423 IGKV1-27A0A075B6S5 117 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 NDUFB3O43676 98 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 ECDO95905 644 aaPredicted RBP15.69■□□□□ 0.1
SF3A1-202ENST00000411423 ACAA1P09110 424 aaPredicted RBP15.69■□□□□ 0.1
SF3A1-202ENST00000411423 CFPP27918 469 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 HAAOP46952 286 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 CEBPDP49716 269 aaPredicted RBP15.69■□□□□ 0.1
SF3A1-202ENST00000411423 NANOS3P60323 173 aaKnown RBP15.69■□□□□ 0.1
SF3A1-202ENST00000411423 UBE2V2Q15819 145 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 CDONQ4KMG0 1287 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 GPR157Q5UAW9 335 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 METTL11BQ5VVY1 283 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 C12orf54Q6X4T0 127 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 RBMS3Q6XE24 437 aaKnown RBP15.69■□□□□ 0.1
SF3A1-202ENST00000411423 ACP7Q6ZNF0 438 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 ANGPTL5Q86XS5 388 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 PDZD9Q8IXQ8 264 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 CD177Q8N6Q3 437 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 ZNRF1Q8ND25 227 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 GCDHQ92947 438 aaPredicted RBP15.69■□□□□ 0.1
SF3A1-202ENST00000411423 LGALS12Q96DT0 336 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 C9orf16Q9BUW7 83 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 DNTTIP1Q9H147 329 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 PRDM13Q9H4Q3 707 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.69■□□□□ 0.1
SF3A1-202ENST00000411423 EXOGQ9Y2C4 368 aaKnown RBP15.69■□□□□ 0.1
SF3A1-202ENST00000411423 GMPPBQ9Y5P6 360 aa15.69■□□□□ 0.1
SF3A1-202ENST00000411423 DHRS7CA6NNS2 312 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 J3QT63 122 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 PGA5P0DJD9 388 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 GABRA2P47869 451 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 OR12D2P58182 307 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 ZNF91Q05481 1191 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 C11orf91Q3C1V1 193 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 VMO1Q7Z5L0 202 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 C8orf46Q8TAG6 207 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 TRMT10AQ8TBZ6 339 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms