RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 DMKNQ6E0U4 476 aaPredicted RBP18.7■□□□□ 0.58
PTCD3-203ENST00000409783 SFRP4Q6FHJ7 346 aaPredicted RBP18.7■□□□□ 0.58
PTCD3-203ENST00000409783 FAM166AQ6J272 317 aa18.7■□□□□ 0.58
PTCD3-203ENST00000409783 UTS2BQ765I0 119 aa18.7■□□□□ 0.58
PTCD3-203ENST00000409783 BOLLQ8N9W6 283 aaKnown RBP18.7■□□□□ 0.58
PTCD3-203ENST00000409783 DEFB108BQ8NET1 73 aa18.7■□□□□ 0.58
PTCD3-203ENST00000409783 PP6455Q8WZ26 134 aa18.7■□□□□ 0.58
PTCD3-203ENST00000409783 AQP3Q92482 292 aa18.7■□□□□ 0.58
PTCD3-203ENST00000409783 COMMD4Q9H0A8 199 aa18.7■□□□□ 0.58
PTCD3-203ENST00000409783 DOCK11Q5JSL3 2073 aa18.7■□□□□ 0.58
PTCD3-203ENST00000409783 SETD2Q9BYW2 2564 aaPredicted RBP18.69■□□□□ 0.58
PTCD3-203ENST00000409783 IGKV1-9A0A0C4DH69 117 aa18.69■□□□□ 0.58
PTCD3-203ENST00000409783 OOEPA6NGQ2 149 aa18.69■□□□□ 0.58
PTCD3-203ENST00000409783 A8MV72 311 aaPredicted RBP18.69■□□□□ 0.58
PTCD3-203ENST00000409783 INAFM1C9JVW0 142 aa18.69■□□□□ 0.58
PTCD3-203ENST00000409783 DENRO43583 198 aaKnown RBP18.69■□□□□ 0.58
PTCD3-203ENST00000409783 MSMBP08118 114 aa18.69■□□□□ 0.58
PTCD3-203ENST00000409783 RPSAP08865 295 aaKnown RBP18.69■□□□□ 0.58
PTCD3-203ENST00000409783 LYPD2Q6UXB3 125 aa18.69■□□□□ 0.58
PTCD3-203ENST00000409783 FAM90A1Q86YD7 464 aa18.69■□□□□ 0.58
PTCD3-203ENST00000409783 OR13C3Q8NGS6 347 aa18.69■□□□□ 0.58
PTCD3-203ENST00000409783 MYDGFQ969H8 173 aa18.69■□□□□ 0.58
PTCD3-203ENST00000409783 SMIM19Q96E16 107 aa18.69■□□□□ 0.58
PTCD3-203ENST00000409783 SEH1LQ96EE3 360 aa18.69■□□□□ 0.58
PTCD3-203ENST00000409783 TRIM36Q9NQ86 728 aa18.69■□□□□ 0.58
PTCD3-203ENST00000409783 PCDHB10Q9UN67 800 aa18.69■□□□□ 0.58
PTCD3-203ENST00000409783 TPRKBQ9Y3C4 175 aa18.69■□□□□ 0.58
PTCD3-203ENST00000409783 IGKV1-27A0A075B6S5 117 aa18.68■□□□□ 0.58
PTCD3-203ENST00000409783 PLPP2O43688 288 aa18.68■□□□□ 0.58
PTCD3-203ENST00000409783 GATBO75879 557 aaKnown RBP18.68■□□□□ 0.58
PTCD3-203ENST00000409783 ZFP36P26651 326 aaKnown RBP18.68■□□□□ 0.58
PTCD3-203ENST00000409783 DVL1P1P54792 670 aaPredicted RBP18.68■□□□□ 0.58
PTCD3-203ENST00000409783 WNT4P56705 351 aa18.68■□□□□ 0.58
PTCD3-203ENST00000409783 HAGHLQ6PII5 290 aaPredicted RBP18.68■□□□□ 0.58
PTCD3-203ENST00000409783 DCDC5Q6ZRR9 648 aa18.68■□□□□ 0.58
PTCD3-203ENST00000409783 TECTBQ96PL2 329 aa18.68■□□□□ 0.58
PTCD3-203ENST00000409783 WDR13Q9H1Z4 485 aa18.68■□□□□ 0.58
PTCD3-203ENST00000409783 LPAR2Q9HBW0 351 aa18.68■□□□□ 0.58
PTCD3-203ENST00000409783 LSM2Q9Y333 95 aaKnown RBP18.68■□□□□ 0.58
PTCD3-203ENST00000409783 IGHV3OR15-7A0A075B7D8 119 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 TRAV38-1A0A0B4J264 116 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 MYL12BO14950 172 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 AKR7A2O43488 359 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 CPT2P23786 658 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 MPZP25189 248 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 ZNF573Q86YE8 665 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 CALHM1Q8IU99 346 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 PARP16Q8N5Y8 322 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 ZFP41Q8N8Y5 198 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 OR51F2Q8NH61 342 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 TRMT10AQ8TBZ6 339 aaKnown RBP18.67■□□□□ 0.58
PTCD3-203ENST00000409783 NPRL2Q8WTW4 380 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 PGLYRP3Q96LB9 341 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 TMEM160Q9NX00 188 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 MIOXQ9UGB7 285 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 SLC7A11Q9UPY5 501 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 ERGIC3Q9Y282 383 aa18.67■□□□□ 0.58
PTCD3-203ENST00000409783 NIPBLQ6KC79 2804 aaeCLIP18.67■□□□□ 0.58
PTCD3-203ENST00000409783 KIAA1324LA8MWY0 1029 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-203ENST00000409783 A8MXK9 166 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 J3QT63 122 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 SYNGR1O43759 233 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 SERPINA3P01011 423 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 MT-ND2P03891 347 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 RPS2P15880 293 aaKnown RBP18.66■□□□□ 0.58
PTCD3-203ENST00000409783 MUC1P15941 1255 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-203ENST00000409783 ZNF20P17024 532 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 ATF1P18846 271 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 HAAOP46952 286 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 FUT6P51993 359 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 RBM48Q5RL73 367 aaKnown RBP18.66■□□□□ 0.58
PTCD3-203ENST00000409783 ASPHD2Q6ICH7 369 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 ZNF841Q6ZN19 808 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 DNAAF1Q8NEP3 725 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 GHSRQ92847 366 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 TMEM186Q96B77 213 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 NEIL1Q96FI4 390 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-203ENST00000409783 CTSZQ9UBR2 303 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 KCNS2Q9ULS6 477 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 ZNF281Q9Y2X9 895 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 POLR3KQ9Y2Y1 108 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-203ENST00000409783 ZFHX3Q15911 3703 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 WNK2Q9Y3S1 2297 aa18.66■□□□□ 0.58
PTCD3-203ENST00000409783 NF1P21359 2839 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 FAM230AA0A1W2PPH8 454 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 FCN3O75636 299 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 AMY2BP19961 511 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 TAS2R43P59537 309 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 RPS11P62280 158 aaKnown RBP eCLIP18.65■□□□□ 0.58
PTCD3-203ENST00000409783 ACSM1Q08AH1 577 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 CNN3Q15417 329 aaKnown RBP18.65■□□□□ 0.58
PTCD3-203ENST00000409783 CRIP3Q6Q6R5 217 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 GLCCI1Q86VQ1 547 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 ANGPTL5Q86XS5 388 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 OR13C5Q8NGS8 318 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 GPR148Q8TDV2 347 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 OR5M11Q96RB7 305 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 MND1Q9BWT6 205 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 PKIBQ9C010 78 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 HIF1ANQ9NWT6 349 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms