RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 NICN1Q9BSH3 213 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 TM2D1Q9BX74 207 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 SELENOIQ9C0D9 397 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 ZMAT3Q9HA38 289 aaKnown RBP12.15□□□□□ -0.46
LIMS2-206ENST00000409754 PROCRQ9UNN8 238 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 GTF3C1Q12789 2109 aa12.15□□□□□ -0.46
LIMS2-206ENST00000409754 IGKV1-27A0A075B6S5 117 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 MEIS3P1A6NDR6 274 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 FIGNL2A6NMB9 653 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 CST4P01036 141 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 NGFP01138 241 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 CGAP01215 116 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 TPOP07202 933 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 GSTP1P09211 210 aaKnown RBP12.15□□□□□ -0.47
LIMS2-206ENST00000409754 PLA2G2AP14555 144 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 MGMTP16455 207 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 WNT5AP41221 380 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 RAB25P57735 213 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 TBC1D28Q2M2D7 210 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 C1orf185Q5T7R7 199 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 PLCXD3Q63HM9 321 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 RTL6Q6ICC9 239 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 ASCL4Q6XD76 172 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 FJX1Q86VR8 437 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 OR56B2PQ8NGI1 322 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 OR5L1Q8NGL2 311 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 OR4C16Q8NGL9 310 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 OR6F1Q8NGZ6 308 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 PIGCQ92535 297 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 STARD4Q96DR4 205 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 METTL9Q9H1A3 318 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 C20orf85Q9H1P6 137 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 MCUBQ9NWR8 336 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 PTTG3PQ9NZH4 202 aa12.15□□□□□ -0.47
LIMS2-206ENST00000409754 ELF5Q9UKW6 265 aaPredicted RBP12.15□□□□□ -0.47
LIMS2-206ENST00000409754 C7orf66A4D0T2 115 aa12.14□□□□□ -0.47
LIMS2-206ENST00000409754 ICMTO60725 284 aa12.14□□□□□ -0.47
LIMS2-206ENST00000409754 HOXD4P09016 255 aaPredicted RBP12.14□□□□□ -0.47
LIMS2-206ENST00000409754 TMEM225BP0DP42 221 aa12.14□□□□□ -0.47
LIMS2-206ENST00000409754 GNB3P16520 340 aa12.14□□□□□ -0.47
LIMS2-206ENST00000409754 RCVRNP35243 200 aa12.14□□□□□ -0.47
LIMS2-206ENST00000409754 MRPL49Q13405 166 aaKnown RBP12.14□□□□□ -0.47
LIMS2-206ENST00000409754 PNLIPRP3Q17RR3 467 aa12.14□□□□□ -0.47
LIMS2-206ENST00000409754 STEAP1BQ6NZ63 245 aa12.14□□□□□ -0.47
LIMS2-206ENST00000409754 FTMTQ8N4E7 242 aa12.14□□□□□ -0.47
LIMS2-206ENST00000409754 OR51T1Q8NGJ9 327 aa12.14□□□□□ -0.47
LIMS2-206ENST00000409754 RAB3CQ96E17 227 aa12.14□□□□□ -0.47
LIMS2-206ENST00000409754 FAM215AQ9Y5M1 114 aa12.14□□□□□ -0.47
LIMS2-206ENST00000409754 FOXI3A8MTJ6 420 aaPredicted RBP12.13□□□□□ -0.47
LIMS2-206ENST00000409754 SOCS1O15524 211 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 ZNF780AO75290 641 aaPredicted RBP12.13□□□□□ -0.47
LIMS2-206ENST00000409754 TOXO94900 526 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 NDUFB6O95139 128 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 CYB5AP00167 134 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 CD74P04233 296 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 CD3DP04234 171 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 CBR1P16152 277 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 HIST1H1DP16402 221 aaKnown RBP12.13□□□□□ -0.47
LIMS2-206ENST00000409754 SERPINA2P20848 420 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 CPT2P23786 658 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 HOXC12P31275 282 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 TIMP3P35625 211 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 EIF2B2P49770 351 aaKnown RBP12.13□□□□□ -0.47
LIMS2-206ENST00000409754 TMEM50BP56557 158 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 P2RY6Q15077 328 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 PLAC9Q5JTB6 97 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 FAAP20Q6NZ36 180 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 CD163Q86VB7 1156 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 C17orf78Q8N4C9 275 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 PXT1Q8NFP0 134 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 FAM57AQ8TBR7 257 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 ST6GAL2Q96JF0 529 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 PAPOLGQ9BWT3 736 aaKnown RBP12.13□□□□□ -0.47
LIMS2-206ENST00000409754 POFUT1Q9H488 388 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 ELL3Q9HB65 397 aaPredicted RBP12.13□□□□□ -0.47
LIMS2-206ENST00000409754 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.13□□□□□ -0.47
LIMS2-206ENST00000409754 IL36GQ9NZH8 169 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 ZNF221Q9UK13 617 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 ESPL1Q14674 2120 aa12.13□□□□□ -0.47
LIMS2-206ENST00000409754 UTP20O75691 2785 aaKnown RBP12.12□□□□□ -0.47
LIMS2-206ENST00000409754 A0A0A6YYJ9 748 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 ZNF850A8MQ14 1090 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 MFNGO00587 321 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 PEX14O75381 377 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 IL2RAP01589 272 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 RRAS2P62070 204 aaPredicted RBP12.12□□□□□ -0.47
LIMS2-206ENST00000409754 PRDX4Q13162 271 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 HLXQ14774 488 aaPredicted RBP12.12□□□□□ -0.47
LIMS2-206ENST00000409754 ARL6IP1Q15041 203 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 RSU1Q15404 277 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 ZNF782Q6ZMW2 699 aaPredicted RBP12.12□□□□□ -0.47
LIMS2-206ENST00000409754 BEND4Q6ZU67 534 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 RFPL4BQ6ZWI9 263 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 TRAPPC6BQ86SZ2 158 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 ZNF610Q8N9Z0 462 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 WDR31Q8NA23 367 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 OR10K1Q8NGX5 313 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 GHITMQ9H3K2 345 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 CDH20Q9HBT6 801 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 OBP2BQ9NPH6 170 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms