RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 FAM3AP98173 230 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 GUCA2AQ02747 115 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 FHL5Q5TD97 284 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 CLEC9AQ6UXN8 241 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 BIRC8Q96P09 236 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 SEBOXQ9HB31 216 aaPredicted RBP7.53□□□□□ -1.2
SCN9A-203ENST00000409672 MASP2O00187 686 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 SEMA7AO75326 666 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 MPZL1O95297 269 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 EMP1P54849 157 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 LOXL3P58215 753 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 HIKESHIQ53FT3 197 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 FA2HQ7L5A8 372 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 ARIH2OSQ8N7S6 290 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 OR1F12Q8NHA8 337 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 NRTNQ99748 197 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 FAAP24Q9BTP7 215 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 KCNE3Q9Y6H6 103 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 C4AP0C0L4 1744 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 TMSB15BA0A087X1C1 80 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 IGHV3-72A0A0B4J1Y9 119 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 PAX5Q02548 391 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 TBCEQ15813 527 aaPredicted RBP7.53□□□□□ -1.2
SCN9A-203ENST00000409672 FAM43BQ6ZT52 329 aaPredicted RBP7.53□□□□□ -1.2
SCN9A-203ENST00000409672 OR2A1Q8NGT9 310 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 C4orf45Q96LM5 186 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 LOC389332A0A1B0GUA5 103 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 ZNF727A8MUV8 499 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 OR2B8PP59922 312 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 PLK5Q496M5 336 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 FFAR4Q5NUL3 377 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 OR52N4Q8NGI2 321 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 S1PR5Q9H228 398 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 BOLA1Q9Y3E2 137 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 INSIG2Q9Y5U4 225 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 ORM1P02763 201 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 CSN3P07498 182 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 TMPRSS3P57727 454 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 ZNF787Q6DD87 383 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 ZNF841Q6ZN19 808 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 OR4S1Q8NGB4 309 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 OR2A14Q96R47 310 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 SLA2Q9H6Q3 261 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 LHX9Q9NQ69 397 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 AQP8O94778 261 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 ANKRD34CP0C6C1 535 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 RFPL4BQ6ZWI9 263 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 LRP11Q86VZ4 500 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 ZCCHC14Q8WYQ9 949 aaKnown RBP7.53□□□□□ -1.2
SCN9A-203ENST00000409672 SNX22Q96L94 193 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 MRGPRX4Q96LA9 322 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 REPIN1Q9BWE0 567 aaKnown RBP7.53□□□□□ -1.2
SCN9A-203ENST00000409672 TMEM262E9PQX1 116 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 ADAM10O14672 748 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 ZNF354AO60765 605 aaPredicted RBP7.53□□□□□ -1.2
SCN9A-203ENST00000409672 RAB5AP20339 215 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 RSPO4Q2I0M5 234 aaPredicted RBP7.53□□□□□ -1.2
SCN9A-203ENST00000409672 SVBPQ8N300 66 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 OR5D13Q8NGL4 314 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 UCK1Q9HA47 277 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 VSIG4Q9Y279 399 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 KPTNQ9Y664 436 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 A0A1W2PNV4 684 aa7.52□□□□□ -1.2
SCN9A-203ENST00000409672 BMP2P12643 396 aa7.52□□□□□ -1.2
SCN9A-203ENST00000409672 ZNF528Q3MIS6 628 aa7.52□□□□□ -1.2
SCN9A-203ENST00000409672 TIGITQ495A1 244 aa7.52□□□□□ -1.2
SCN9A-203ENST00000409672 RNASEKQ6P5S7 137 aaKnown RBP7.52□□□□□ -1.2
SCN9A-203ENST00000409672 CELF2-AS1Q8N7Q2 184 aa7.52□□□□□ -1.2
SCN9A-203ENST00000409672 OR13C8Q8NGS7 320 aa7.52□□□□□ -1.2
SCN9A-203ENST00000409672 GRAMD2BQ96HH9 432 aa7.52□□□□□ -1.2
SCN9A-203ENST00000409672 CNTD2Q9H8S5 307 aa7.52□□□□□ -1.2
SCN9A-203ENST00000409672 TCF20Q9UGU0 1960 aaKnown RBP7.52□□□□□ -1.2
SCN9A-203ENST00000409672 GPRIN2O60269 458 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 ACSM5Q6NUN0 579 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 RHNO1Q9BSD3 238 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 GAR1Q9NY12 217 aaKnown RBP7.52□□□□□ -1.21
SCN9A-203ENST00000409672 ERRFI1Q9UJM3 462 aaPredicted RBP7.52□□□□□ -1.21
SCN9A-203ENST00000409672 PAFAH1B2P68402 229 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 RNPS1Q15287 305 aaKnown RBP7.52□□□□□ -1.21
SCN9A-203ENST00000409672 SLC25A30Q5SVS4 291 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 AFMIDQ63HM1 303 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 OR13D1Q8NGV5 346 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 OR13G1Q8NGZ3 307 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 RAB18Q9NP72 206 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 WBP1LQ9NX94 342 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 DFFBO76075 338 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 ZNF32P17041 273 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 PPICP45877 212 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 MRPS10P82664 201 aaKnown RBP7.52□□□□□ -1.21
SCN9A-203ENST00000409672 GTF3C1Q12789 2109 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 PABPC1L2AQ5JQF8 200 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 RPUSD3Q6P087 351 aaKnown RBP7.52□□□□□ -1.21
SCN9A-203ENST00000409672 ZNF620Q6ZNG0 422 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 NRARPQ7Z6K4 114 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 TMPRSS5Q9H3S3 457 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 ASCL3Q9NQ33 180 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 H7C2G1 150 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 PDGFBP01127 241 aaPredicted RBP7.52□□□□□ -1.21
SCN9A-203ENST00000409672 ZBTB37Q5TC79 503 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 ABHD3Q8WU67 409 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms