RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 CELA3BP08861 270 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 ANXA3P12429 323 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 ZNF14P17017 642 aaPredicted RBP11.58□□□□□ -0.56
LIMS1-204ENST00000409441 ZNF20P17024 532 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 RAB3AP20336 220 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 ACTBP60709 375 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 ACTG1P63261 375 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 SFRP4Q6FHJ7 346 aaPredicted RBP11.58□□□□□ -0.56
LIMS1-204ENST00000409441 RAB12Q6IQ22 244 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 PGAP1Q75T13 922 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 ZNF584Q8IVC4 421 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 ASCC1Q8N9N2 400 aaKnown RBP11.58□□□□□ -0.56
LIMS1-204ENST00000409441 CCDC54Q8NEL0 328 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 OR1J2Q8NGS2 313 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 GPX8Q8TED1 209 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 FAM222BQ8WU58 562 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 HYLS1Q96M11 299 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 PSMG3-AS1Q96PY0 264 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 SPOCK3Q9BQ16 436 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 FBLN5Q9UBX5 448 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 ZNF107Q9UII5 783 aaPredicted RBP11.58□□□□□ -0.56
LIMS1-204ENST00000409441 RAB22AQ9UL26 194 aa11.58□□□□□ -0.56
LIMS1-204ENST00000409441 IGHV1-18A0A0C4DH31 117 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 SYNGR3O43761 229 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 DOK2O60496 412 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 APOC1P02654 83 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 IL5P05113 134 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 AKAIN1P0CW23 69 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 SULT1A3P0DMM9 295 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 SULT1A4P0DMN0 295 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 GNALP38405 381 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 CX3CR1P49238 355 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 ZNF121P58317 390 aaPredicted RBP11.57□□□□□ -0.56
LIMS1-204ENST00000409441 RAB35Q15286 201 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 PCGF3Q3KNV8 242 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 TMEM255AQ5JRV8 349 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 DOK3Q7L591 496 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 BIVMQ86UB2 503 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 OR8B12Q8NGG6 310 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 OR1F12Q8NHA8 337 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 ITFG2Q969R8 447 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 ADAT3Q96EY9 351 aaPredicted RBP11.57□□□□□ -0.56
LIMS1-204ENST00000409441 NUDT16L1Q9BRJ7 211 aaKnown RBP11.57□□□□□ -0.56
LIMS1-204ENST00000409441 RANBP3Q9H6Z4 567 aaPredicted RBP11.57□□□□□ -0.56
LIMS1-204ENST00000409441 ING4Q9UNL4 249 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 ADGRG4Q8IZF6 3080 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 PRR14LQ5THK1 2151 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 METTL21EPA6NDL7 271 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 DPRXA6NFQ7 191 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 ICMTO60725 284 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 KDM4BO94953 1096 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 LPLP06858 475 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 CECR9P0C854 216 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 PTHLHP12272 177 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 CCL2P13500 99 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 CRYGSP22914 178 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 PRKXP51817 358 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 ECH1Q13011 328 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 RBMS2Q15434 407 aaKnown RBP11.57□□□□□ -0.56
LIMS1-204ENST00000409441 C3orf36Q3SXR2 165 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 TMEM108Q6UXF1 575 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 MYPOPQ86VE0 399 aaPredicted RBP11.57□□□□□ -0.56
LIMS1-204ENST00000409441 ZNF283Q8N7M2 679 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 SLC30A7Q8NEW0 376 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 OR11H7Q8NGC8 314 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 OR51E1Q8TCB6 317 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 TMEM246Q9BRR3 403 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 GON7Q9BXV9 100 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 KCNK15Q9H427 330 aa11.57□□□□□ -0.56
LIMS1-204ENST00000409441 LOC100509620A0A075B734 347 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 MEIKINA0A087WXM9 373 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 OR6C6A6NF89 314 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 ARPC1BO15143 372 aaKnown RBP11.56□□□□□ -0.56
LIMS1-204ENST00000409441 IGLV3-1P01715 115 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 COX5BP10606 129 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 CD40P25942 277 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 APLNRP35414 380 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 HTR5AP47898 357 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 GSK3AP49840 483 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 RSPO1Q2MKA7 263 aaPredicted RBP11.56□□□□□ -0.56
LIMS1-204ENST00000409441 TMEM229BQ8NBD8 167 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 OR4D6Q8NGJ1 314 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 FAM46BQ96A09 425 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 POM121L2Q96KW2 1035 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 ESRP2Q9H6T0 727 aaKnown RBP11.56□□□□□ -0.56
LIMS1-204ENST00000409441 CNTD2Q9H8S5 307 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 GPN1Q9HCN4 374 aaPredicted RBP11.56□□□□□ -0.56
LIMS1-204ENST00000409441 NKIRAS2Q9NYR9 191 aa11.56□□□□□ -0.56
LIMS1-204ENST00000409441 USP9YO00507 2555 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-204ENST00000409441 A0A0U1RQV5 110 aa11.55□□□□□ -0.56
LIMS1-204ENST00000409441 C5orf49A4QMS7 147 aa11.55□□□□□ -0.56
LIMS1-204ENST00000409441 SNRPGP15A8MWD9 76 aa11.55□□□□□ -0.56
LIMS1-204ENST00000409441 F5H5K5 113 aa11.55□□□□□ -0.56
LIMS1-204ENST00000409441 SSNA1O43805 119 aa11.55□□□□□ -0.56
LIMS1-204ENST00000409441 DBHP09172 617 aa11.55□□□□□ -0.56
LIMS1-204ENST00000409441 GSTT2P0CG29 244 aa11.55□□□□□ -0.56
LIMS1-204ENST00000409441 GTF2F2P13984 249 aa11.55□□□□□ -0.56
LIMS1-204ENST00000409441 CCNOP22674 350 aa11.55□□□□□ -0.56
LIMS1-204ENST00000409441 PTAFRP25105 342 aa11.55□□□□□ -0.56
LIMS1-204ENST00000409441 VEGFCP49767 419 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms