RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 MYDGFQ969H8 173 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 TMEM186Q96B77 213 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 ADAT3Q96EY9 351 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 ERVK-18Q9QC07 812 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 JMJD1CQ15652 2540 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 TRAV20A0A0B4J274 112 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 SRRM5B3KS81 715 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 PTGES3LE9PB15 166 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 ZNF20P17024 532 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 EGR1P18146 543 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 CD80P33681 288 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 CDK5R1Q15078 307 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 RNLSQ5VYX0 342 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 TEX36Q5VZQ5 186 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 UTS2BQ765I0 119 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 OR13C3Q8NGS6 347 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 AQP3Q92482 292 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 FGGYQ96C11 551 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 HIF1ANQ9NWT6 349 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 SLC7A11Q9UPY5 501 aa16.6■□□□□ 0.25
PDLIM2-207ENST00000409417 WNK2Q9Y3S1 2297 aa16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 OGG1O15527 345 aa16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 NDUFA2O43678 99 aa16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 CDK1P06493 297 aa16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 RPS2P15880 293 aaKnown RBP16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 MUC1P15941 1255 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 MICBQ29980 383 aa16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 HAGHLQ6PII5 290 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 NLRC3Q7RTR2 1065 aa16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 FAM90A1Q86YD7 464 aa16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 ZNF671Q8TAW3 534 aa16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 ZNF184Q99676 751 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 ERGIC3Q9Y282 383 aa16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 TPRKBQ9Y3C4 175 aa16.59■□□□□ 0.25
PDLIM2-207ENST00000409417 SVEP1Q4LDE5 3571 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 TNFRSF13BO14836 293 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 MYL12BO14950 172 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 RRP9O43818 475 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 FOXH1O75593 365 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 RHBDL1O75783 438 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 LALBAP00709 142 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 PCMT1P22061 227 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 ZFP36P26651 326 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 HAAOP46952 286 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 FUT6P51993 359 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 SLC35A2P78381 396 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 ESCO2Q56NI9 601 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 C12orf43Q96C57 262 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 SMIM19Q96E16 107 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 NEIL1Q96FI4 390 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 CNBD2Q96M20 576 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 CDCA4Q9BXL8 241 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 DUSP21Q9H596 190 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 LRCH1Q9Y2L9 728 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 PCDHGB5Q9Y5G0 923 aa16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 SIRT4Q9Y6E7 314 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-207ENST00000409417 AKR7A2O43488 359 aa16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 CRLF1O75462 422 aa16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 WNT4P56705 351 aa16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 SEC61A1P61619 476 aaKnown RBP16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 LCN2P80188 198 aa16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 CNN3Q15417 329 aaKnown RBP16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 LYPD2Q6UXB3 125 aa16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 NANOGP1Q8N7R0 232 aa16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 OR8B3Q8NGG8 313 aa16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 NPRL2Q8WTW4 380 aa16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 OR8B2Q96RD0 313 aa16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 WDR13Q9H1Z4 485 aa16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 PAK1IP1Q9NWT1 392 aaPredicted RBP16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 DHDHQ9UQ10 334 aa16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 POLR3KQ9Y2Y1 108 aaPredicted RBP16.57■□□□□ 0.24
PDLIM2-207ENST00000409417 IGHV3OR15-7A0A075B7D8 119 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 PPIAL4CA0A0B4J2A2 164 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 FAM230AA0A1W2PPH8 454 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 A8MXK9 166 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 J3QT63 122 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 CRHBPP24387 322 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 MPZP25189 248 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 PITPNBP48739 271 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 TAS2R43P59537 309 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 DMKNQ6E0U4 476 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 PARP16Q8N5Y8 322 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 DNAAF1Q8NEP3 725 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 TRMT10AQ8TBZ6 339 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 GPR148Q8TDV2 347 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 RGP1Q92546 391 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 SGCDQ92629 289 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 CDC42EP3Q9UKI2 254 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 POLDIP2Q9Y2S7 368 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 ZNF281Q9Y2X9 895 aa16.56■□□□□ 0.24
PDLIM2-207ENST00000409417 IGKV1-9A0A0C4DH69 117 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 A0A0G2JMP0 313 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 A0A0X1KG70 313 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 KIAA1324LA8MWY0 1029 aaPredicted RBP16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 GYPAP02724 150 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 ATF1P18846 271 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 PRKACBP22694 351 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 RIPPLY3P57055 190 aa16.55■□□□□ 0.24
PDLIM2-207ENST00000409417 CR1LQ2VPA4 569 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms