RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 RAB1BQ9H0U4 201 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 METTL17Q9H7H0 456 aaPredicted RBP11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 NKIRAS2Q9NYR9 191 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 UNC79Q9P2D8 2635 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 A0A1B0GWJ7 208 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 hCG_1807616A0A1W2PRN6 198 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 PQLC2LA1A4F0 135 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 H7C417 338 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 CDIPTO14735 213 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 SYNGR1O43759 233 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 CLEC2LP0C7M8 214 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 CALCBP10092 127 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 FSTP19883 344 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 BDKRB2P30411 391 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 PMELP40967 661 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 ATP5J2P56134 94 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 MTCP1P56278 107 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 GNG3P63215 75 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 SPCS2Q15005 226 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 FAM201AQ5SY85 155 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 ZNF529Q6P280 563 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 LRRTM1Q86UE6 522 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 SCCPDHQ8NBX0 429 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 OR5A2Q8NGI9 324 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 CCL17Q92583 94 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 YIPF5Q969M3 257 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 ZNF488Q96MN9 340 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 GFI1Q99684 422 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 C1orf123Q9NWV4 160 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 IL19Q9UHD0 177 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 ANGPTL7O43827 346 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 SSX4O60224 188 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 ARL6IP5O75915 188 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 CYB5R3P00387 301 aaPredicted RBP11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 MYL9P24844 172 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 SDC2P34741 201 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 CD200P41217 278 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 OR3A4PP47883 348 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 PTH2RP49190 550 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 SRP9P49458 86 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 KRT74Q7RTS7 529 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 NR2C2APQ86WQ0 139 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 C11orf53Q8IXP5 236 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 JAGN1Q8N5M9 183 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 ZNF525Q8N782 197 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 SEH1LQ96EE3 360 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 GPER1Q99527 375 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 OR51I2Q9H344 312 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 GCM1Q9NP62 436 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 TMEM138Q9NPI0 162 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 C14orf119Q9NWQ9 140 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 FOXJ3Q9UPW0 622 aa11.92□□□□□ -0.5
CHRNA1-204ENST00000409323 TANC2Q9HCD6 1990 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 ANKRD17O75179 2603 aaKnown RBP11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 IGHV1-69-2A0A0G2JMI3 117 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 OR5B21A6NL26 309 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 MAGEB3O15480 346 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 ERCC1P07992 297 aaPredicted RBP11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 CD55P08174 381 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 ADH4P08319 380 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 DAOP14920 347 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 PRKACBP22694 351 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 DNASE1P24855 282 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 FGF9P31371 208 aaPredicted RBP11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 RBP2P50120 134 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 FUT6P51993 359 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 KISS1Q15726 138 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 PCGF3Q3KNV8 242 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 FAM209AQ5JX71 171 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 DYNC2LI1Q8TCX1 351 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 SLAMF9Q96A28 289 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 KCTD7Q96MP8 289 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 DIRC2Q96SL1 478 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 EGLN1Q9GZT9 426 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 KCNK15Q9H427 330 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 NEK6Q9HC98 313 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 PPP1R3CQ9UQK1 317 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 GSTK1Q9Y2Q3 226 aa11.91□□□□□ -0.5
CHRNA1-204ENST00000409323 WNT9BO14905 357 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 AKR7A2O43488 359 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 CDRT1O95170 752 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 ZNF182P17025 639 aaPredicted RBP11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 ZNF93P35789 620 aaPredicted RBP11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 ATP1B3P54709 279 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 TESK1Q15569 626 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 METAP1DQ6UB28 335 aaPredicted RBP11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 LHFPL2Q6ZUX7 228 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 SLC25A26Q70HW3 274 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 C1QL2Q7Z5L3 287 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 CDH24Q86UP0 819 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 SPERTQ8NA61 448 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 OR10K1Q8NGX5 313 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 NDNFQ8TB73 568 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 SPSB1Q96BD6 273 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 SLITRK2Q9H156 845 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 ABCB9Q9NP78 766 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 SNTG1Q9NSN8 517 aa11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 NOP16Q9Y3C1 178 aaKnown RBP11.9□□□□□ -0.5
CHRNA1-204ENST00000409323 A0A0B4J203 849 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 LRP5LA4QPB2 252 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms