RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 ALX4Q9H161 411 aaPredicted RBP11.47□□□□□ -0.57
PTPRN-202ENST00000409251 PISDQ9UG56 409 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 OR52A1Q9UKL2 312 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 APC2O95996 2303 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 ARHGAP21Q5T5U3 1957 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 TRBV5-5A0A0J9YX44 114 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 SHISA8B8ZZ34 492 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 SCGNO76038 276 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 PET100P0DJ07 73 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 ZNF93P35789 620 aaPredicted RBP11.47□□□□□ -0.57
PTPRN-202ENST00000409251 STARD6P59095 220 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 COL19A1Q14993 1142 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 ZNF74Q16587 644 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 BCORP1Q8N888 145 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 OR56B1Q8NGI3 324 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 OR51E1Q8TCB6 317 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 ARHGAP5-AS1Q96IT6 56 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 VDAC3Q9Y277 283 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 HIF3AQ9Y2N7 669 aa11.47□□□□□ -0.57
PTPRN-202ENST00000409251 MFNGO00587 321 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 PHYHO14832 338 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 SLC34A2O95436 690 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 CT45A8P0DMV1 189 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 CT45A9P0DMV2 189 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 MMP9P14780 707 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 FBLP22087 321 aaKnown RBP11.46□□□□□ -0.57
PTPRN-202ENST00000409251 P2RY4P51582 365 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 ABCA11PQ4W5N1 156 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 CT45A2Q5DJT8 189 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 TRIM61Q5EBN2 209 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 CDC20BQ86Y33 519 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 PLXDC1Q8IUK5 500 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 GPHA2Q96T91 129 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 RTN4RQ9BZR6 473 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 MMP25Q9NPA2 562 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 TREM2Q9NZC2 230 aa11.46□□□□□ -0.57
PTPRN-202ENST00000409251 SMCO3A2RU48 225 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 G3V3Y1 287 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 HEXBP07686 556 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 HLA-DOBP13765 273 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 FHL5Q5TD97 284 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 PRSS54Q6PEW0 395 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF248Q8NDW4 579 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 OR5L1Q8NGL2 311 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 ADAMTS17Q8TE56 1095 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 OR8B4Q96RC9 309 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 PRO3102Q9H379 93 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 C5orf66Q9H5L9 145 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 LUZP4Q9P127 313 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 PADI1Q9ULC6 663 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 DMRT1Q9Y5R6 373 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF850A8MQ14 1090 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 RAB27BO00194 218 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 CHATP28329 748 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 DDTP30046 118 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 NHLH2Q02577 135 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 EXD3Q8N9H8 876 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 ADAMTS18Q8TE60 1221 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 RNF128Q8TEB7 428 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 ABHD14AQ9BUJ0 271 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 PPP4R1LQ9P1A2 415 aa11.46□□□□□ -0.58
PTPRN-202ENST00000409251 NXT1Q9UKK6 140 aaKnown RBP11.46□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF587BE7ETH6 402 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 IGLV3-19P01714 112 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 HSD11B1P28845 292 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 SLC37A1P57057 533 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 OR8G1Q15617 311 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 ASPHD2Q6ICH7 369 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 C20orf196Q8IYI0 205 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 SLC26A10Q8NG04 563 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 TBL1XR1Q9BZK7 514 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 LIPGQ9Y5X9 500 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 PCNX3Q9H6A9 2034 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 ROS1P08922 2347 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 ZFP92A6NM28 416 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 ARPC3O15145 178 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 ABHD16AO95870 558 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 CSTBP04080 98 aaKnown RBP11.45□□□□□ -0.58
PTPRN-202ENST00000409251 VSIG8P0DPA2 414 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 BLVRBP30043 206 aaPredicted RBP11.45□□□□□ -0.58
PTPRN-202ENST00000409251 ALDH3B1P43353 468 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF239Q16600 458 aaKnown RBP11.45□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF574Q6ZN55 896 aaPredicted RBP11.45□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF610Q8N9Z0 462 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 MCHR2Q969V1 340 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 MRPL24Q96A35 216 aaKnown RBP11.45□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF524Q96C55 264 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 LRFN5Q96NI6 719 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 HDHD3Q9BSH5 251 aaPredicted RBP11.45□□□□□ -0.58
PTPRN-202ENST00000409251 BORCS7-ASMTA0A0B4J1R7 106 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 OR3A4PP47883 348 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 NOVA1P51513 510 aaKnown RBP11.45□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF880Q6PDB4 577 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 OGFOD3Q6PK18 319 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 SULF2Q8IWU5 870 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 HAS2Q92819 552 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 TMEM59Q9BXS4 323 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 GAB2Q9UQC2 676 aa11.45□□□□□ -0.58
PTPRN-202ENST00000409251 MRPS28Q9Y2Q9 187 aaKnown RBP11.45□□□□□ -0.58
PTPRN-202ENST00000409251 SPTAN1Q13813 2472 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms