RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ERVK13-1Q9NX77 482 aa14.94□□□□□ -0.02
PDLIM2-206ENST00000409141 FRRS1LQ9P0K9 344 aa14.94□□□□□ -0.02
PDLIM2-206ENST00000409141 IGHV2-70DA0A0C4DH43 119 aa14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 TMPRSS2O15393 492 aa14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 RHBDL1O75783 438 aa14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 NANOS3P60323 173 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 PAX2Q02962 417 aa14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 EGFL6Q8IUX8 553 aa14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 SYS1Q8N2H4 156 aa14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 OR5T2Q8NGG2 359 aa14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 AQP3Q92482 292 aa14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 C12orf43Q96C57 262 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 CCL13Q99616 98 aa14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 NUDT16L1Q9BRJ7 211 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 VCXQ9H320 206 aa14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 OCEL1Q9H607 264 aa14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 ISG20L2Q9H9L3 353 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 SNTG1Q9NSN8 517 aa14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 KAAG1Q9UBP8 84 aa14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 NKX1-2Q9UD57 310 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-206ENST00000409141 DOCK11Q5JSL3 2073 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 KIR2DS1A0A191URI9 304 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 ANKRD61A6NGH8 418 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 SERPINA3P01011 423 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 GLRA1P23415 457 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 CAPGP40121 348 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 HAAOP46952 286 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 CCR9P51686 369 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 SLC34A1Q06495 639 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 PAX8Q06710 450 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 IL18R1Q13478 541 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 CD276Q5ZPR3 534 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 ZNF573Q86YE8 665 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 FGF20Q9NP95 211 aaPredicted RBP14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 SLC7A11Q9UPY5 501 aa14.92□□□□□ -0.02
PDLIM2-206ENST00000409141 COL6A5A8TX70 2615 aa14.91□□□□□ -0.02
PDLIM2-206ENST00000409141 PQLC2LA1A4F0 135 aa14.91□□□□□ -0.02
PDLIM2-206ENST00000409141 DVL1O14640 695 aa14.91□□□□□ -0.02
PDLIM2-206ENST00000409141 ALKBH1Q13686 389 aaKnown RBP14.91□□□□□ -0.02
PDLIM2-206ENST00000409141 SLC36A1Q7Z2H8 476 aa14.91□□□□□ -0.02
PDLIM2-206ENST00000409141 TRMT10AQ8TBZ6 339 aaKnown RBP14.91□□□□□ -0.02
PDLIM2-206ENST00000409141 C10orf35Q96D05 121 aa14.91□□□□□ -0.02
PDLIM2-206ENST00000409141 MDFIQ99750 246 aa14.91□□□□□ -0.02
PDLIM2-206ENST00000409141 ZNF649Q9BS31 505 aa14.91□□□□□ -0.02
PDLIM2-206ENST00000409141 SMURF1Q9HCE7 757 aa14.91□□□□□ -0.02
PDLIM2-206ENST00000409141 FAM230AA0A1W2PPH8 454 aa14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 IRGMA1A4Y4 181 aa14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 H0YAE9 185 aa14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 ISG15P05161 165 aa14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 EPHA1P21709 976 aa14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 DCKP27707 260 aa14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 ARMCX4Q5H9R4 360 aa14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 ATPAF1Q5TC12 328 aaPredicted RBP14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 C8orf59Q8N0T1 100 aaPredicted RBP14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 ZNF676Q8N7Q3 588 aa14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 NPRL2Q8WTW4 380 aa14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 DACT3Q96B18 629 aaPredicted RBP14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 TMIGD2Q96BF3 282 aa14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 NLKQ9UBE8 527 aa14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 HSPE1-MOB4S4R3N1 261 aa14.9□□□□□ -0.02
PDLIM2-206ENST00000409141 A0A1B0GW55 424 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 OR4C45A6NMZ5 311 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 C22orf46C9J442 243 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 J3QT63 122 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 TCF21O43680 179 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 SYNGR1O43759 233 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 ENSAO43768 121 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 GATBO75879 557 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 DUX4L2P0CJ85 424 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 DUX4L3P0CJ86 424 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 DUX4L4P0CJ87 422 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 DUX4L5P0CJ88 424 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 DUX4L6P0CJ89 424 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 DUX4L7P0CJ90 424 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 LIMS3P0CW19 117 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 LIMS4P0CW20 117 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 GBX2P52951 348 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 MRPL28Q13084 256 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 UBE2V2Q15819 145 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 STUMQ69YW2 141 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 DUX4L9Q6RFH8 374 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 ANGPTL5Q86XS5 388 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 FAM216BQ8N7L0 139 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 PP6455Q8WZ26 134 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 ST8SIA4Q92187 359 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 FGGYQ96C11 551 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 JAM3Q9BX67 310 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 CHST5Q9GZS9 411 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 RASL12Q9NYN1 266 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 DUX4Q9UBX2 424 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 HHLA2Q9UM44 414 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 NKX6-3A6NJ46 265 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 OR2AT4A6NND4 320 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 E9PI62 339 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 NDUFB3O43676 98 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 ECDO95905 644 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 FSHBP01225 129 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 GNAO1P09471 354 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 ZNF20P17024 532 aa14.89□□□□□ -0.03
PDLIM2-206ENST00000409141 AMY2BP19961 511 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms