RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 IGHV1-2P23083 117 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 VEGFCP49767 419 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 ACTBP60709 375 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 ACTG1P63261 375 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 MALLQ13021 153 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 ZBTB37Q5TC79 503 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 ZNF787Q6DD87 383 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 Q6ZT83 130 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 BTN2A1Q7KYR7 527 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 MDP1Q86V88 176 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 LIX1LQ8IVB5 337 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 ZNF584Q8IVC4 421 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 DRAXINQ8NBI3 349 aaPredicted RBP11.29□□□□□ -0.6
NDEL1-203ENST00000402554 TMEM104Q8NE00 496 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 OR10R2Q8NGX6 335 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 CA5BP1Q8WTZ4 195 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 AQP3Q92482 292 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 LPAR5Q9H1C0 372 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 ZMAT3Q9HA38 289 aaKnown RBP11.29□□□□□ -0.6
NDEL1-203ENST00000402554 MCUBQ9NWR8 336 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 COQ3Q9NZJ6 369 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 ZNF816-ZNF321PA0A0X1KG74 233 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 MEIS3P1A6NDR6 274 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 CLDN14O95500 239 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 GTF2F2P13984 249 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 MTCP1P56278 107 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 UBE2NP61088 152 aaKnown RBP11.29□□□□□ -0.6
NDEL1-203ENST00000402554 ZNF260Q3ZCT1 412 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 CDNFQ49AH0 187 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 SLC22A6Q4U2R8 563 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 TMEM255AQ5JRV8 349 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 Q6ZTK2 550 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 CCDC36Q8IYA8 594 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 CMBLQ96DG6 245 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 TECTBQ96PL2 329 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 URM1Q9BTM9 101 aaKnown RBP11.29□□□□□ -0.6
NDEL1-203ENST00000402554 ACTR6Q9GZN1 396 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 BANF2Q9H503 90 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 KCNN3Q9UGI6 736 aa11.29□□□□□ -0.6
NDEL1-203ENST00000402554 HCFC1P51610 2035 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 FAM230AA0A1W2PPH8 454 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 TMEM235A6NFC5 223 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 RAD51DO75771 328 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 H2AFB2P0C5Z0 115 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 PSMB1P20618 241 aaKnown RBP11.28□□□□□ -0.6
NDEL1-203ENST00000402554 PTGER4P35408 488 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 EIF2B2P49770 351 aaKnown RBP11.28□□□□□ -0.6
NDEL1-203ENST00000402554 RAG2P55895 527 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 VWA1Q6PCB0 445 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 LHFPL2Q6ZUX7 228 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 MRPL21Q7Z2W9 205 aaKnown RBP11.28□□□□□ -0.6
NDEL1-203ENST00000402554 C1QL2Q7Z5L3 287 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 CDH24Q86UP0 819 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 PIGCQ92535 297 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 BORCS8Q96FH0 119 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 NICN1Q9BSH3 213 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 REPIN1Q9BWE0 567 aaKnown RBP11.28□□□□□ -0.6
NDEL1-203ENST00000402554 SELENOIQ9C0D9 397 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 SLC7A11Q9UPY5 501 aa11.28□□□□□ -0.6
NDEL1-203ENST00000402554 SETXQ7Z333 2677 aaKnown RBP11.28□□□□□ -0.6
NDEL1-203ENST00000402554 A0A0A6YYD4 124 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 A0A1W2PP11 408 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 LYZL6O75951 148 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 AKAIN1P0CW23 69 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 CHRNB4P30926 498 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 RBP2P50120 134 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 ZP1P60852 638 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 RPS27AP62979 156 aaKnown RBP11.27□□□□□ -0.6
NDEL1-203ENST00000402554 FOXF2Q12947 444 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 GK2Q14410 553 aaPredicted RBP11.27□□□□□ -0.6
NDEL1-203ENST00000402554 GABRA6Q16445 453 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 FAAP20Q6NZ36 180 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 MOB3CQ70IA8 216 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 SLC30A7Q8NEW0 376 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 OR56B1Q8NGI3 324 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 OR6F1Q8NGZ6 308 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 OR56B4Q8NH76 319 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 MS4A3Q96HJ5 214 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 C20orf85Q9H1P6 137 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 ELL3Q9HB65 397 aaPredicted RBP11.27□□□□□ -0.6
NDEL1-203ENST00000402554 PTTG3PQ9NZH4 202 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 ELF5Q9UKW6 265 aaPredicted RBP11.27□□□□□ -0.6
NDEL1-203ENST00000402554 STARD10Q9Y365 291 aa11.27□□□□□ -0.6
NDEL1-203ENST00000402554 MBD3L4A6NDZ8 208 aaPredicted RBP11.27□□□□□ -0.61
NDEL1-203ENST00000402554 MBD3L3A6NE82 208 aaPredicted RBP11.27□□□□□ -0.61
NDEL1-203ENST00000402554 MBD3L5A6NJ08 208 aaPredicted RBP11.27□□□□□ -0.61
NDEL1-203ENST00000402554 NGFP01138 241 aa11.27□□□□□ -0.61
NDEL1-203ENST00000402554 MELTFP08582 738 aa11.27□□□□□ -0.61
NDEL1-203ENST00000402554 HOXD4P09016 255 aaPredicted RBP11.27□□□□□ -0.61
NDEL1-203ENST00000402554 TMEM225BP0DP42 221 aa11.27□□□□□ -0.61
NDEL1-203ENST00000402554 HOXB1P14653 301 aaPredicted RBP11.27□□□□□ -0.61
NDEL1-203ENST00000402554 MGMTP16455 207 aa11.27□□□□□ -0.61
NDEL1-203ENST00000402554 SERPINA2P20848 420 aa11.27□□□□□ -0.61
NDEL1-203ENST00000402554 AGAP20933 346 aa11.27□□□□□ -0.61
NDEL1-203ENST00000402554 FUT6P51993 359 aa11.27□□□□□ -0.61
NDEL1-203ENST00000402554 ATP1B3P54709 279 aa11.27□□□□□ -0.61
NDEL1-203ENST00000402554 TAS2R19P59542 299 aa11.27□□□□□ -0.61
NDEL1-203ENST00000402554 PLCXD3Q63HM9 321 aa11.27□□□□□ -0.61
NDEL1-203ENST00000402554 GABRG1Q8N1C3 465 aa11.27□□□□□ -0.61
NDEL1-203ENST00000402554 TMEM229BQ8NBD8 167 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms