RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 IGHV2OR16-5A0A0B4J2B6 119 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 hCG_38984A0A1B0GV85 526 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 IFITM5A6NNB3 132 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 DHRS3O75911 302 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 HOXD4P09016 255 aaPredicted RBP10.04□□□□□ -0.8
SKA3-203ENST00000400018 SOX6P35712 828 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 MTNR1BP49286 362 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 POU3F4P49335 361 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 SEZ6L2Q6UXD5 910 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 MOB3CQ70IA8 216 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 TGIF2LYQ8IUE0 185 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 OR8H3Q8N146 312 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 TMEM104Q8NE00 496 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 DIRAS2Q96HU8 199 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 WACQ9BTA9 647 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 C1QTNF5Q9BXJ0 243 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 IL36RNQ9UBH0 155 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 OR5V1Q9UGF6 321 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 DOPEY1Q5JWR5 2465 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 GCN1Q92616 2671 aaKnown RBP10.04□□□□□ -0.8
SKA3-203ENST00000400018 GGT3PA6NGU5 568 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 ZNF98A6NK75 572 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 F8VVB4 439 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 F8VWA3 439 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 C16orf97H3BN30 126 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 NUPL2O15504 423 aaKnown RBP10.04□□□□□ -0.8
SKA3-203ENST00000400018 GMDSO60547 372 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 ARL6IP5O75915 188 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 ZNF205O95201 554 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 SERPINA3P01011 423 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 IGKV3-15P01624 115 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 CASP6P55212 293 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 UCP2P55851 309 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 TBC1D28Q2M2D7 210 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 KRTAP27-1Q3LI81 207 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 MOGAT2Q3SYC2 334 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 GDPGP1Q6ZNW5 385 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 MRPL21Q7Z2W9 205 aaKnown RBP10.04□□□□□ -0.8
SKA3-203ENST00000400018 MRGPRGQ86SM5 289 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 CALHM1Q8IU99 346 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 SEMA6DQ8NFY4 1073 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 OR1M1Q8NGA1 313 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 AKAP1Q92667 903 aaKnown RBP eCLIP10.04□□□□□ -0.8
SKA3-203ENST00000400018 GPER1Q99527 375 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 SEC22CQ9BRL7 303 aa10.04□□□□□ -0.8
SKA3-203ENST00000400018 MRPL15Q9P015 296 aaKnown RBP10.04□□□□□ -0.8
SKA3-203ENST00000400018 USP9YO00507 2555 aaPredicted RBP10.04□□□□□ -0.8
SKA3-203ENST00000400018 DPRXA6NFQ7 191 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 HSPB2A8KAH6 182 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 ABCD4O14678 606 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 SIAH2O43255 324 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 ISG15P05161 165 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 CD2P06729 351 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 IGFBP3P17936 291 aaPredicted RBP10.03□□□□□ -0.8
SKA3-203ENST00000400018 GZMKP49863 264 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 GPM6AP51674 278 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 PPP1CBP62140 327 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 BSPH1Q075Z2 132 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 PSG7Q13046 419 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 HSPB2Q16082 182 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 CNIH2Q6PI25 160 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 ZNF843Q8N446 348 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 NICN1Q9BSH3 213 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 ING3Q9NXR8 418 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 GATBO75879 557 aaKnown RBP10.03□□□□□ -0.8
SKA3-203ENST00000400018 DUSP1P28562 367 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 SNTB2Q13425 540 aaKnown RBP10.03□□□□□ -0.8
SKA3-203ENST00000400018 P2RY6Q15077 328 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 SLC22A6Q4U2R8 563 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 FAM209BQ5JX69 171 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 SPANXN2Q5MJ10 180 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 LAMTOR1Q6IAA8 161 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 C5orf24Q7Z6I8 188 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 MUCL1Q96DR8 90 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 WBP1Q96G27 269 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 ZFP3Q96NJ6 502 aa10.03□□□□□ -0.8
SKA3-203ENST00000400018 CBR1P16152 277 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 NAAAQ02083 359 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 C2orf76Q3KRA6 126 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 PLCXD3Q63HM9 321 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 OLFML2AQ68BL7 652 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 DOK3Q7L591 496 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 KLF14Q8TD94 323 aaPredicted RBP10.02□□□□□ -0.81
SKA3-203ENST00000400018 NANOS1Q8WY41 292 aaKnown RBP10.02□□□□□ -0.81
SKA3-203ENST00000400018 SLC25A38Q96DW6 304 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 CCDC59Q9P031 241 aaKnown RBP10.02□□□□□ -0.81
SKA3-203ENST00000400018 KIAA2026Q5HYC2 2103 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 A0A0B4J293 547 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 A1L4Q6 167 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 LANCL1O43813 399 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 IGLV3-1P01715 115 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 ZNF35P13682 527 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 PPP3R1P63098 170 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 ZNF79Q15937 498 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 BAK1Q16611 211 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 SLC22A25Q6T423 547 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 FAM131AQ6UXB0 335 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 COLCA1Q6ZS62 124 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 ZNF826PQ6ZT77 177 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 CMTM4Q8IZR5 234 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms