RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 IMPAD1Q9NX62 359 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 DUX4Q9UBX2 424 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 KPTNQ9Y664 436 aa12.29□□□□□ -0.44
SMIM11A-203ENST00000399299 CENPVL3A0A0U1RRI6 287 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 A0A1W2PQL4 384 aaPredicted RBP12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 METTL15A6NJ78 407 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 E9PQ18 207 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 SIGLEC5O15389 551 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 RHBDL1O75783 438 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 HKR1P10072 659 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 GLRA1P23415 457 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 CFPP27918 469 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 ALDH3A2P51648 485 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 IL13RA1P78552 427 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 CDONQ4KMG0 1287 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 SLC25A30Q5SVS4 291 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 CLVS2Q5SYC1 327 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 CATSPERDQ86XM0 798 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 FGFRL1Q8N441 504 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 KIR3DL3Q8N743 410 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 YIPF7Q8N8F6 280 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 OR14K1Q8NGZ2 314 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 SLC25A28Q96A46 364 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 GAFA1Q96PS6 74 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 TBX5Q99593 518 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 DCTN5Q9BTE1 182 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 SNTG1Q9NSN8 517 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 NLKQ9UBE8 527 aa12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMIM11A-203ENST00000399299 A0A1B0GVI7 797 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 OR2AT4A6NND4 320 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 APOL3O95236 402 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 ACAA1P09110 424 aaPredicted RBP12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 ATP6V1E1P36543 226 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 CAV3P56539 151 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 GMFBP60983 142 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 ISL1P61371 349 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 SNRPGP62308 76 aaKnown RBP12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 ARF6P62330 175 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 FOXL1Q12952 345 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 SLC9A3R2Q15599 337 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 DEFB112Q30KQ8 113 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 HAGHLQ6PII5 290 aaPredicted RBP12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 ZNF573Q86YE8 665 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 CCDC54Q8NEL0 328 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 OR10H4Q8NGA5 316 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 OR5T2Q8NGG2 359 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 GATAD2BQ8WXI9 593 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 TMIGD2Q96BF3 282 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 DUX5Q96PT3 197 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 NOX4Q9NPH5 578 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 RASL12Q9NYN1 266 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 ZNF222Q9UK12 451 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 SLC22A13Q9Y226 551 aa12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 SOX21Q9Y651 276 aaPredicted RBP12.27□□□□□ -0.45
SMIM11A-203ENST00000399299 PQLC2LA1A4F0 135 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 J3QT63 122 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 EBAG9O00559 213 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 NOS1APO75052 506 aaPredicted RBP12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 RPP14O95059 124 aaKnown RBP12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 SELLP14151 372 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 IKZF1Q13422 519 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 OCLNQ16625 522 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 DGUOKQ16854 277 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 AWAT1Q58HT5 328 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 DMRTC1Q5HYR2 192 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 MEDAGQ5VYS4 303 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 METAP1DQ6UB28 335 aaPredicted RBP12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 CMTM4Q8IZR5 234 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 CBR4Q8N4T8 237 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 C3orf56Q8N813 242 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 POC1AQ8NBT0 407 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 RORBQ92753 470 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 ACOXLQ9NUZ1 547 aa12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 SLC25A10Q9UBX3 287 aaPredicted RBP12.26□□□□□ -0.45
SMIM11A-203ENST00000399299 IGKV1D-17A0A075B6S4 117 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 IGHV1-69DA0A0B4J2H0 117 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 MDFIC2A0A1B0GVS7 189 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 IGHV1-69P01742 117 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 PGA5P0DJD9 388 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 PSG2P11465 335 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 MPZP25189 248 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 HAAOP46952 286 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 ACTC1P68032 377 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 ACTA1P68133 377 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 ZNF85Q03923 595 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 SMIM21Q3B7S5 101 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 RUSC1-AS1Q66K80 236 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 Q6YL49 198 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 ACP7Q6ZNF0 438 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 C1orf122Q6ZSJ8 110 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 FAM220AQ7Z4H9 259 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 TMEM86BQ8N661 226 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 LHX4Q969G2 390 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 UBE2FQ969M7 185 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 ZDHHC16Q969W1 377 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 SDSLQ96GA7 329 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 C9orf16Q9BUW7 83 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 PLEKHA1Q9HB21 404 aa12.25□□□□□ -0.45
SMIM11A-203ENST00000399299 GPR173Q9NS66 373 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms