RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SYT6Q5T7P8 510 aaPredicted RBP10.44□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CLEC2AQ6UVW9 174 aa10.44□□□□□ -0.74
HLA-DQB1-203ENST00000399082 WDR82Q6UXN9 313 aa10.44□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CALHM1Q8IU99 346 aa10.44□□□□□ -0.74
HLA-DQB1-203ENST00000399082 GCSAMQ8N6F7 178 aa10.44□□□□□ -0.74
HLA-DQB1-203ENST00000399082 SCCPDHQ8NBX0 429 aa10.44□□□□□ -0.74
HLA-DQB1-203ENST00000399082 TMEM203Q969S6 136 aa10.44□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ZCCHC4Q9H5U6 513 aa10.44□□□□□ -0.74
HLA-DQB1-203ENST00000399082 NOX4Q9NPH5 578 aa10.44□□□□□ -0.74
HLA-DQB1-203ENST00000399082 C1orf123Q9NWV4 160 aa10.44□□□□□ -0.74
HLA-DQB1-203ENST00000399082 NDUFB11Q9NX14 153 aa10.44□□□□□ -0.74
HLA-DQB1-203ENST00000399082 FAM230AA0A1W2PPH8 454 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 A0A1W2PPK0 400 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 TMEM210A6NLX4 147 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 NDUFS8O00217 210 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CDIPTO14735 213 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 SULT1B1O43704 296 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 SYNGR1O43759 233 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 GPX5O75715 221 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ALX3O95076 343 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 IGHV2-70P01814 119 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 MPZP25189 248 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 GABRA5P31644 462 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CFHR2P36980 270 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 TGFBR2P37173 567 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 NR4A2P43354 598 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 FABP5Q01469 135 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 HFEQ30201 348 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ACSM3Q53FZ2 586 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 AVPI1Q5T686 147 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CD200R1LQ6Q8B3 271 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 SPNS3Q6ZMD2 512 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ANGPTL5Q86XS5 388 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 SERPINA12Q8IW75 414 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CIARTQ8N365 385 aaPredicted RBP10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 MS4A15Q8N5U1 240 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 C19orf18Q8NEA5 215 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 DNAAF1Q8NEP3 725 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 AQP3Q92482 292 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ERGIC1Q969X5 290 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 TECTBQ96PL2 329 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 SPACA5Q96QH8 159 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 HIST1H2AAQ96QV6 131 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 NKX3-1Q99801 234 aaPredicted RBP10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 FN3KRPQ9HA64 309 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 WIPI2Q9Y4P8 454 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 FLNAP21333 2647 aaKnown RBP10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ABCA2Q9BZC7 2435 aa10.43□□□□□ -0.74
HLA-DQB1-203ENST00000399082 IGHV4-61A0A0C4DH41 118 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 A6NLC8 198 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CLDN25C9JDP6 229 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ZNF205O95201 554 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 LHBP01229 141 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CD2P06729 351 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 UCHL1P09936 223 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 JUNBP17275 347 aaPredicted RBP10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 FUT6P51993 359 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 TMEM33P57088 247 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 DSCR9P59020 149 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 MZT1Q08AG7 82 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ZMYND11Q15326 602 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CNN3Q15417 329 aaKnown RBP10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 HAGHLQ6PII5 290 aaPredicted RBP10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 LYPD6Q86Y78 171 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 SPSB1Q96BD6 273 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 SEH1LQ96EE3 360 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 PIMREGQ9BSJ6 248 aa10.42□□□□□ -0.74
HLA-DQB1-203ENST00000399082 YLPM1P49750 1951 aaKnown RBP10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CREBBPQ92793 2442 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 IGKV1-12A0A0C4DH73 117 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 SHISA3A0PJX4 238 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 SRRM5B3KS81 715 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 RNF223E7ERA6 249 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 J3QT63 122 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 IFNL4K9M1U5 179 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CCRL2O00421 344 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 GABRPO00591 440 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 PPIHO43447 177 aaKnown RBP10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 RGS9O75916 674 aaPredicted RBP10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 SERPINA3P01011 423 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 IGKV1D-12P01611 117 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 SLC25A16P16260 332 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ADRA2CP18825 462 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 PRKACBP22694 351 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CD80P33681 288 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 GPR6P46095 362 aaPredicted RBP10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 HAAOP46952 286 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ZP1P60852 638 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CEACAM19Q7Z692 300 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 LRRTM1Q86UE6 522 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 MAPK1IP1LQ8NDC0 245 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 OR52N4Q8NGI2 321 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 OR5D14Q8NGL3 314 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 LRRC29Q8WV35 223 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 RFT1Q96AA3 541 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 BORCS8Q96FH0 119 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ZNF488Q96MN9 340 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 RNF7Q9UBF6 113 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 SLC7A11Q9UPY5 501 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms