RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 GPR173Q9NS66 373 aa13.85□□□□□ -0.19
APTR-201ENST00000398043 FRRS1LQ9P0K9 344 aa13.85□□□□□ -0.19
APTR-201ENST00000398043 STAB1Q9NY15 2570 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 A6NIN4 97 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 RNF212BA8MTL3 300 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 DVL1O14640 695 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 TCF21O43680 179 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 VENTXO95231 258 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 CLIC3O95833 236 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 ISG15P05161 165 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 ADARB1P78563 741 aaKnown RBP13.84□□□□□ -0.19
APTR-201ENST00000398043 RAB40BQ12829 278 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 SMN1Q16637 294 aaKnown RBP13.84□□□□□ -0.19
APTR-201ENST00000398043 C11orf91Q3C1V1 193 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 OGFRL1Q5TC84 451 aaPredicted RBP13.84□□□□□ -0.19
APTR-201ENST00000398043 USP43Q70EL4 1123 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 FAM220AQ7Z4H9 259 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 RDH10Q8IZV5 341 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 CCDC54Q8NEL0 328 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 OR52I1Q8NGK6 324 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 SPATA3Q8NHX4 192 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 ANGPTL6Q8NI99 470 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 CCL13Q99616 98 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 MRI1Q9BV20 369 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 JAM3Q9BX67 310 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 DNTTIP1Q9H147 329 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 ERVK13-1Q9NX77 482 aa13.84□□□□□ -0.19
APTR-201ENST00000398043 A0A1B0GVI7 797 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 LOC107986453A0A1B0GWG9 222 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 TMPRSS2O15393 492 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 SYT7O43581 403 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 ENSAO43768 121 aaKnown RBP13.83□□□□□ -0.2
APTR-201ENST00000398043 PLATP00750 562 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 UBCP0CG48 685 aaKnown RBP13.83□□□□□ -0.2
APTR-201ENST00000398043 MPZP25189 248 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 CCR9P51686 369 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 SCGB2A2Q13296 93 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 UBE2V2Q15819 145 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 HAGHLQ6PII5 290 aaPredicted RBP13.83□□□□□ -0.2
APTR-201ENST00000398043 BTNL3Q6UXE8 466 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 ZNF788Q6ZQV5 615 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 LHFPL3Q86UP9 236 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 SYS1Q8N2H4 156 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 FAM216BQ8N7L0 139 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 ZNF555Q8NEP9 628 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 OR5T2Q8NGG2 359 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 C4orf36Q96KX1 117 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 TECTBQ96PL2 329 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 ISG20L2Q9H9L3 353 aaKnown RBP13.83□□□□□ -0.2
APTR-201ENST00000398043 ZNF222Q9UK12 451 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 NUP50Q9UKX7 468 aa13.83□□□□□ -0.2
APTR-201ENST00000398043 RPL36Q9Y3U8 105 aaKnown RBP13.83□□□□□ -0.2
APTR-201ENST00000398043 IGKV1D-17A0A075B6S4 117 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 ANKRD61A6NGH8 418 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 OR4C45A6NMZ5 311 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 H3BSH0 61 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 SYNGR1O43759 233 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 NOS1APO75052 506 aaPredicted RBP13.82□□□□□ -0.2
APTR-201ENST00000398043 FADS2O95864 444 aaKnown RBP13.82□□□□□ -0.2
APTR-201ENST00000398043 TFF1P04155 84 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 SELLP14151 372 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 MMP9P14780 707 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 HILS1P60008 231 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 ACTA2P62736 377 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 ACTG2P63267 376 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 GABPB1Q06547 395 aaPredicted RBP13.82□□□□□ -0.2
APTR-201ENST00000398043 ARMCX4Q5H9R4 360 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 CD276Q5ZPR3 534 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 POC1AQ8NBT0 407 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 ZNF671Q8TAW3 534 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 CNIH3Q8TBE1 160 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 C10orf35Q96D05 121 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 GAFA1Q96PS6 74 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 SLC6A7Q99884 636 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 ALG8Q9BVK2 526 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 CHST5Q9GZS9 411 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 FGF20Q9NP95 211 aaPredicted RBP13.82□□□□□ -0.2
APTR-201ENST00000398043 INPP5EQ9NRR6 644 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 SNTG1Q9NSN8 517 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 NLKQ9UBE8 527 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 ZNF69Q9UC07 566 aa13.82□□□□□ -0.2
APTR-201ENST00000398043 IGKV1-27A0A075B6S5 117 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 OR2AT4A6NND4 320 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 J3QLW9 94 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 J3QT63 122 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 LIPFP07098 398 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 ACAA1P09110 424 aaPredicted RBP13.81□□□□□ -0.2
APTR-201ENST00000398043 LIMS3P0CW19 117 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 LIMS4P0CW20 117 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 PGA5P0DJD9 388 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 IGHV4-38-2P0DP08 117 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 ZNF19P17023 458 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 GLRA1P23415 457 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 HAAOP46952 286 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 GMFBP60983 142 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 FGF12P61328 243 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 ERVK11-1P61568 191 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 TMEM244Q5VVB8 128 aa13.81□□□□□ -0.2
APTR-201ENST00000398043 C9orf139Q6ZV77 190 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms