RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 FABP12A6NFH5 140 aa23.43■■□□□ 1.34
CPNE1-203ENST00000397442 WIPF3A6NGB9 483 aa23.43■■□□□ 1.34
CPNE1-203ENST00000397442 TMEM14DPA8MWL7 114 aa23.43■■□□□ 1.34
CPNE1-203ENST00000397442 SPRY1O43609 319 aaPredicted RBP23.43■■□□□ 1.34
CPNE1-203ENST00000397442 RNF224P0DH78 156 aa23.43■■□□□ 1.34
CPNE1-203ENST00000397442 PDZK1IP1Q13113 114 aa23.43■■□□□ 1.34
CPNE1-203ENST00000397442 MADCAM1Q13477 382 aa23.43■■□□□ 1.34
CPNE1-203ENST00000397442 ADIPOQQ15848 244 aa23.43■■□□□ 1.34
CPNE1-203ENST00000397442 ASCL4Q6XD76 172 aa23.43■■□□□ 1.34
CPNE1-203ENST00000397442 WDR86Q86TI4 376 aa23.43■■□□□ 1.34
CPNE1-203ENST00000397442 DTX3Q8N9I9 347 aa23.43■■□□□ 1.34
CPNE1-203ENST00000397442 PTX4Q96A99 478 aa23.43■■□□□ 1.34
CPNE1-203ENST00000397442 UBBP0CG47 229 aa23.42■■□□□ 1.34
CPNE1-203ENST00000397442 TMEM225BP0DP42 221 aa23.42■■□□□ 1.34
CPNE1-203ENST00000397442 GNG3P63215 75 aa23.42■■□□□ 1.34
CPNE1-203ENST00000397442 TMEM104Q8NE00 496 aa23.42■■□□□ 1.34
CPNE1-203ENST00000397442 OR8S1Q8NH09 359 aa23.42■■□□□ 1.34
CPNE1-203ENST00000397442 RAB40AQ8WXH6 277 aa23.42■■□□□ 1.34
CPNE1-203ENST00000397442 HS3ST6Q96QI5 342 aa23.42■■□□□ 1.34
CPNE1-203ENST00000397442 SLC22A4Q9H015 551 aa23.42■■□□□ 1.34
CPNE1-203ENST00000397442 GHRLQ9UBU3 117 aa23.42■■□□□ 1.34
CPNE1-203ENST00000397442 IGKV1-12A0A0C4DH73 117 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 ANGPTL7O43827 346 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 PLATP00750 562 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 IGKV1D-12P01611 117 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 IGFBP2P18065 325 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 OR8G1Q15617 311 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 FAM76BQ5HYJ3 339 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 FAM131AQ6UXB0 335 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 OR10AD1Q8NGE0 317 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 GTF3AQ92664 365 aaKnown RBP23.41■■□□□ 1.34
CPNE1-203ENST00000397442 NEUROG1Q92886 237 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 POU2F3Q9UKI9 436 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 ING4Q9UNL4 249 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 NOP16Q9Y3C1 178 aaKnown RBP23.41■■□□□ 1.34
CPNE1-203ENST00000397442 A0A1W2PP11 408 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 E7EQL1 145 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 PLAUP00749 431 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 RAB6AP20340 208 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 KIR2DL3P43628 341 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 HAAOP46952 286 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 METAP1DQ6UB28 335 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-203ENST00000397442 OR2W3Q7Z3T1 314 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 ZNF611Q8N823 705 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 OR13G1Q8NGZ3 307 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 FAM46BQ96A09 425 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 SDHCQ99643 169 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-203ENST00000397442 MICU1Q9BPX6 476 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 RTL8AQ9BWD3 113 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 OR51I2Q9H344 312 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 RNF115Q9Y4L5 304 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 MYO18BQ8IUG5 2567 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 USP9XQ93008 2570 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-203ENST00000397442 ROS1P08922 2347 aa23.41■■□□□ 1.34
CPNE1-203ENST00000397442 UBR5O95071 2799 aaPredicted RBP23.4■■□□□ 1.34
CPNE1-203ENST00000397442 ICE1Q9Y2F5 2266 aa23.4■■□□□ 1.34
CPNE1-203ENST00000397442 CTAG2O75638 210 aa23.4■■□□□ 1.34
CPNE1-203ENST00000397442 RANBP1P43487 201 aa23.4■■□□□ 1.34
CPNE1-203ENST00000397442 PPP5CP53041 499 aa23.4■■□□□ 1.34
CPNE1-203ENST00000397442 SLC22A6Q4U2R8 563 aa23.4■■□□□ 1.34
CPNE1-203ENST00000397442 PXT1Q8NFP0 134 aa23.4■■□□□ 1.34
CPNE1-203ENST00000397442 TMEM204Q9BSN7 226 aa23.4■■□□□ 1.34
CPNE1-203ENST00000397442 RAB22AQ9UL26 194 aa23.4■■□□□ 1.34
CPNE1-203ENST00000397442 DOPEY1Q5JWR5 2465 aa23.39■■□□□ 1.34
CPNE1-203ENST00000397442 ZSCAN5BA6NJL1 495 aa23.39■■□□□ 1.34
CPNE1-203ENST00000397442 OR4A8P0C604 315 aa23.39■■□□□ 1.34
CPNE1-203ENST00000397442 CD40LGP29965 261 aa23.39■■□□□ 1.34
CPNE1-203ENST00000397442 TALDO1P37837 337 aa23.39■■□□□ 1.34
CPNE1-203ENST00000397442 OR10K1Q8NGX5 313 aa23.39■■□□□ 1.34
CPNE1-203ENST00000397442 LILRB1Q8NHL6 650 aaPredicted RBP23.39■■□□□ 1.34
CPNE1-203ENST00000397442 KCNG3Q8TAE7 436 aa23.39■■□□□ 1.34
CPNE1-203ENST00000397442 S100A16Q96FQ6 103 aaKnown RBP23.39■■□□□ 1.34
CPNE1-203ENST00000397442 TAAR3PQ9P1P4 343 aa23.39■■□□□ 1.34
CPNE1-203ENST00000397442 KDM4BO94953 1096 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 CDK2P24941 298 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 SRSF1Q07955 248 aaKnown RBP eCLIP23.38■■□□□ 1.333e-6■□□□□ 9.1
CPNE1-203ENST00000397442 SLC25A26Q70HW3 274 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 ZNF573Q86YE8 665 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 ZSCAN4Q8NAM6 433 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-203ENST00000397442 SRRQ9GZT4 340 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 A0A0G2JMP0 313 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 A0A0X1KG70 313 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 F5H5P2 479 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 CDC14BO60729 498 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 SELENOVP59797 346 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 OR4M2Q8NGB6 313 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 OR51F2Q8NH61 342 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 ZFAND2BQ8WV99 257 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 PIK3IP1Q96FE7 263 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 S100A13Q99584 98 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 BANF2Q9H503 90 aa23.38■■□□□ 1.33
CPNE1-203ENST00000397442 PTBP1P26599 531 aaKnown RBP eCLIP23.37■■□□□ 1.33
CPNE1-203ENST00000397442 MAB21L1Q13394 359 aa23.37■■□□□ 1.33
CPNE1-203ENST00000397442 IL18Q14116 193 aa23.37■■□□□ 1.33
CPNE1-203ENST00000397442 HAGHLQ6PII5 290 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-203ENST00000397442 IZUMO1Q8IYV9 350 aa23.37■■□□□ 1.33
CPNE1-203ENST00000397442 BORCS5Q969J3 196 aa23.37■■□□□ 1.33
CPNE1-203ENST00000397442 METTL9Q9H1A3 318 aa23.37■■□□□ 1.33
CPNE1-203ENST00000397442 ATG5Q9H1Y0 275 aa23.37■■□□□ 1.33
CPNE1-203ENST00000397442 PLK3Q9H4B4 646 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms