RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 ZNF573Q86YE8 665 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 TRMT10AQ8TBZ6 339 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 BABAM2Q9NXR7 383 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 DNAJB11Q9UBS4 358 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 RRP15Q9Y3B9 282 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 SONP18583 2426 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 PTGES3LE9PB15 166 aa21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 EGR1P18146 543 aa21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 CFHR2P36980 270 aa21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 VHLP40337 213 aa21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 GTF2A1P52655 376 aaPredicted RBP21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 GNB2P62879 340 aa21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 FAM120AOSQ5T036 256 aa21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 RPL22L1Q6P5R6 122 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 NPRL2Q8WTW4 380 aa21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 GATAD2BQ8WXI9 593 aa21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 PP6455Q8WZ26 134 aa21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 TECTBQ96PL2 329 aa21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 LRCH1Q9Y2L9 728 aa21.22■□□□□ 0.99
TSPAN4-207ENST00000397411 F5H0A9 414 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-207ENST00000397411 AKR7A2O43488 359 aa21.21■□□□□ 0.99
TSPAN4-207ENST00000397411 ADAM20O43506 726 aa21.21■□□□□ 0.99
TSPAN4-207ENST00000397411 GYPAP02724 150 aa21.21■□□□□ 0.99
TSPAN4-207ENST00000397411 HAAOP46952 286 aa21.21■□□□□ 0.99
TSPAN4-207ENST00000397411 CNN3Q15417 329 aaKnown RBP21.21■□□□□ 0.99
TSPAN4-207ENST00000397411 CCDC58Q4VC31 144 aa21.21■□□□□ 0.99
TSPAN4-207ENST00000397411 DCAF12L2Q5VW00 463 aa21.21■□□□□ 0.99
TSPAN4-207ENST00000397411 LYPD2Q6UXB3 125 aa21.21■□□□□ 0.99
TSPAN4-207ENST00000397411 MYDGFQ969H8 173 aa21.21■□□□□ 0.99
TSPAN4-207ENST00000397411 SSBP3Q9BWW4 388 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-207ENST00000397411 DOCK11Q5JSL3 2073 aa21.2■□□□□ 0.99
TSPAN4-207ENST00000397411 A0A0G2JMP0 313 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 A0A0X1KG70 313 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 MYL12BO14950 172 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 PHF1O43189 567 aaPredicted RBP21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 MUC1P15941 1255 aaPredicted RBP21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 MYF6P23409 242 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 ZFP36P26651 326 aaKnown RBP21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 PITPNBP48739 271 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 FUT6P51993 359 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 SEC61A1P61619 476 aaKnown RBP21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 UBE2V2Q15819 145 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 OR4M2Q8NGB6 313 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 OR10AC1Q8NH08 325 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 OR52N1Q8NH53 320 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 TSEN15Q8WW01 171 aaKnown RBP21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 ADAT3Q96EY9 351 aaPredicted RBP21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 PDCD1LG2Q9BQ51 273 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 CHST5Q9GZS9 411 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 CLN8Q9UBY8 286 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 OR5V1Q9UGF6 321 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 TPRKBQ9Y3C4 175 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 ARHGAP32A7KAX9 2087 aa21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 SETD2Q9BYW2 2564 aaPredicted RBP21.2■□□□□ 0.98
TSPAN4-207ENST00000397411 FN1P02751 2386 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 PQLC2LA1A4F0 135 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 SRRM5B3KS81 715 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 RRP9O43818 475 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 RHBDL1O75783 438 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 ZFPL1O95159 310 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 HOXB4P17483 251 aaPredicted RBP21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 GLRA1P23415 457 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 SRP14P37108 136 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 TEX36Q5VZQ5 186 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 IL17RELQ6ZVW7 336 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 FAM90A1Q86YD7 464 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 AQP3Q92482 292 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 BORCS8Q96FH0 119 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 ANKRD60Q9BZ19 345 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 NEK6Q9HC98 313 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 DHDHQ9UQ10 334 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 ERGIC3Q9Y282 383 aa21.19■□□□□ 0.98
TSPAN4-207ENST00000397411 SLC1A7O00341 560 aa21.18■□□□□ 0.98
TSPAN4-207ENST00000397411 C21orf33P30042 268 aaPredicted RBP21.18■□□□□ 0.98
TSPAN4-207ENST00000397411 OR51A4Q8NGJ6 313 aa21.18■□□□□ 0.98
TSPAN4-207ENST00000397411 TMIGD2Q96BF3 282 aa21.18■□□□□ 0.98
TSPAN4-207ENST00000397411 CNBD2Q96M20 576 aa21.18■□□□□ 0.98
TSPAN4-207ENST00000397411 SNTG1Q9NSN8 517 aa21.18■□□□□ 0.98
TSPAN4-207ENST00000397411 POLDIP2Q9Y2S7 368 aa21.18■□□□□ 0.98
TSPAN4-207ENST00000397411 WNK2Q9Y3S1 2297 aa21.17■□□□□ 0.98
TSPAN4-207ENST00000397411 NSD1Q96L73 2696 aaPredicted RBP21.17■□□□□ 0.98
TSPAN4-207ENST00000397411 J3QT63 122 aa21.17■□□□□ 0.98
TSPAN4-207ENST00000397411 ATF1P18846 271 aa21.17■□□□□ 0.98
TSPAN4-207ENST00000397411 PRKACBP22694 351 aa21.17■□□□□ 0.98
TSPAN4-207ENST00000397411 GATA3P23771 443 aa21.17■□□□□ 0.98
TSPAN4-207ENST00000397411 ATP1B3P54709 279 aa21.17■□□□□ 0.98
TSPAN4-207ENST00000397411 CDK5R1Q15078 307 aa21.17■□□□□ 0.98
TSPAN4-207ENST00000397411 ANGPTL5Q86XS5 388 aa21.17■□□□□ 0.98
TSPAN4-207ENST00000397411 OR5T2Q8NGG2 359 aa21.17■□□□□ 0.98
TSPAN4-207ENST00000397411 SEH1LQ96EE3 360 aa21.17■□□□□ 0.98
TSPAN4-207ENST00000397411 WDR13Q9H1Z4 485 aa21.17■□□□□ 0.98
TSPAN4-207ENST00000397411 RAB26Q9ULW5 256 aa21.17■□□□□ 0.98
TSPAN4-207ENST00000397411 TMPRSS2O15393 492 aa21.16■□□□□ 0.98
TSPAN4-207ENST00000397411 CDK1P06493 297 aa21.16■□□□□ 0.98
TSPAN4-207ENST00000397411 UTS2BQ765I0 119 aa21.16■□□□□ 0.98
TSPAN4-207ENST00000397411 SERPINA12Q8IW75 414 aa21.16■□□□□ 0.98
TSPAN4-207ENST00000397411 OR5D14Q8NGL3 314 aa21.16■□□□□ 0.98
TSPAN4-207ENST00000397411 C12orf43Q96C57 262 aaKnown RBP21.16■□□□□ 0.98
TSPAN4-207ENST00000397411 CCL13Q99616 98 aa21.16■□□□□ 0.98
TSPAN4-207ENST00000397411 C7orf69Q9H7B7 122 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms