RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 C5orf63A6NC05 138 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 OR6C6A6NF89 314 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 RAB27BO00194 218 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 SCGNO76038 276 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 SULT1A3P0DMM9 295 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 SULT1A4P0DMN0 295 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 PRF1P14222 555 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 ERP29P30040 261 aaKnown RBP12.86□□□□□ -0.35
CAPN3-207ENST00000397200 GSK3AP49840 483 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 IDH3GP51553 393 aaPredicted RBP12.86□□□□□ -0.35
CAPN3-207ENST00000397200 PCGF3Q3KNV8 242 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 SFRP4Q6FHJ7 346 aaPredicted RBP12.86□□□□□ -0.35
CAPN3-207ENST00000397200 OR11H7Q8NGC8 314 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 AQP3Q92482 292 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 SPTSSAQ969W0 71 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 MED30Q96HR3 178 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 FAM71F1Q96KD3 344 aaPredicted RBP12.86□□□□□ -0.35
CAPN3-207ENST00000397200 WFIKKN1Q96NZ8 548 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 ATPIF1Q9UII2 106 aa12.86□□□□□ -0.35
CAPN3-207ENST00000397200 FAM172BPA6NC97 362 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 DHRS7CA6NNS2 312 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 M0R135 149 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 ICMTO60725 284 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 DHRS3O75911 302 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 IGKV3-15P01624 115 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 IL5P05113 134 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 SERPINA5P05154 406 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 MELTFP08582 738 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 AKAIN1P0CW23 69 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 VSIG8P0DPA2 414 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 COX5BP10606 129 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 ZNF14P17017 642 aaPredicted RBP12.85□□□□□ -0.35
CAPN3-207ENST00000397200 APLNRP35414 380 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 ZNF93P35789 620 aaPredicted RBP12.85□□□□□ -0.35
CAPN3-207ENST00000397200 ZNF83P51522 516 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 GALK2Q01415 458 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 SRSF1Q07955 248 aaKnown RBP eCLIP12.85□□□□□ -0.35
CAPN3-207ENST00000397200 TNK1Q13470 666 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 SNTB1Q13884 538 aaKnown RBP12.85□□□□□ -0.35
CAPN3-207ENST00000397200 CDK10Q15131 360 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 MOGAT2Q3SYC2 334 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 OR10K2Q6IF99 312 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 DRAM2Q6UX65 266 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 C22orf34Q6ZV56 151 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 UTS2BQ765I0 119 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 WFDC8Q8IUA0 241 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 FAM169BQ8N8A8 192 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 TMEM229BQ8NBD8 167 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 CPEB3Q8NE35 698 aaKnown RBP12.85□□□□□ -0.35
CAPN3-207ENST00000397200 ZNF799Q96GE5 643 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 ZNF75AQ96N20 296 aa12.85□□□□□ -0.35
CAPN3-207ENST00000397200 NPDC1Q9NQX5 325 aaPredicted RBP12.85□□□□□ -0.35
CAPN3-207ENST00000397200 SPTBN1Q01082 2364 aaKnown RBP12.85□□□□□ -0.35
CAPN3-207ENST00000397200 IGKV1-9A0A0C4DH69 117 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 METTL21EPA6NDL7 271 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 TUBAL3A6NHL2 446 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 F5H5K5 113 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 ATP6V1G1O75348 118 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 THBDP07204 575 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 CELA3BP08861 270 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 RNF224P0DH78 156 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 ALDH3B1P43353 468 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 VEGFCP49767 419 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 ZNF260Q3ZCT1 412 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 METTL11BQ5VVY1 283 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 FAAP20Q6NZ36 180 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 CRIP3Q6Q6R5 217 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 NAA40Q86UY6 237 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 COMMD2Q86X83 199 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 ZNF584Q8IVC4 421 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 SLC30A7Q8NEW0 376 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 LINC01560Q8TB33 94 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 ZFAND1Q8TCF1 268 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 PP6455Q8WZ26 134 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 FAM46BQ96A09 425 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 MS4A3Q96HJ5 214 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 FLVCR2Q9UPI3 526 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 NPTNQ9Y639 398 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 FLNCQ14315 2725 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 MEIKINA0A087WXM9 373 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 M0R1B8 84 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 ARPC1BO15143 372 aaKnown RBP12.84□□□□□ -0.35
CAPN3-207ENST00000397200 IGLV1-44P01699 117 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 TAS2R19P59542 299 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 MRPS15P82914 257 aaKnown RBP12.84□□□□□ -0.35
CAPN3-207ENST00000397200 RBMS2Q15434 407 aaKnown RBP12.84□□□□□ -0.35
CAPN3-207ENST00000397200 TBC1D28Q2M2D7 210 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 C3orf36Q3SXR2 165 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 GLDNQ6ZMI3 551 aaPredicted RBP12.84□□□□□ -0.35
CAPN3-207ENST00000397200 OR52H1Q8NGJ2 320 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 CAPSLQ8WWF8 208 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 CHST5Q9GZS9 411 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 NGBQ9NPG2 151 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 ITGB1BP2Q9UKP3 347 aa12.84□□□□□ -0.35
CAPN3-207ENST00000397200 PRR14LQ5THK1 2151 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 LOC100509620A0A075B734 347 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 IGHV1-18A0A0C4DH31 117 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 C5orf49A4QMS7 147 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 HPXP02790 462 aa12.83□□□□□ -0.36
CAPN3-207ENST00000397200 CD74P04233 296 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms