RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 GPER1Q99527 375 aa11.31□□□□□ -0.6
SEC13-209ENST00000397117 MRI1Q9BV20 369 aa11.31□□□□□ -0.6
SEC13-209ENST00000397117 OCEL1Q9H607 264 aa11.31□□□□□ -0.6
SEC13-209ENST00000397117 COMMD3Q9UBI1 195 aa11.31□□□□□ -0.6
SEC13-209ENST00000397117 CGGBP1Q9UFW8 167 aaPredicted RBP11.31□□□□□ -0.6
SEC13-209ENST00000397117 STEAP1Q9UHE8 339 aa11.31□□□□□ -0.6
SEC13-209ENST00000397117 NBEAL1Q6ZS30 2694 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 IGKV1-9A0A0C4DH69 117 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.3□□□□□ -0.6
SEC13-209ENST00000397117 SLC17A2O00624 439 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 TIMM8AO60220 97 aaPredicted RBP11.3□□□□□ -0.6
SEC13-209ENST00000397117 ALDOBP05062 364 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 AZGP1P25311 298 aaKnown RBP11.3□□□□□ -0.6
SEC13-209ENST00000397117 MPV17P39210 176 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 RANBP1P43487 201 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 FABP6P51161 128 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 PSG7Q13046 419 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 PRDX4Q13162 271 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 BEX5Q5H9J7 111 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 MBNL2Q5VZF2 373 aaKnown RBP11.3□□□□□ -0.6
SEC13-209ENST00000397117 VHLLQ6RSH7 139 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 CDH26Q8IXH8 852 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 ZDHHC23Q8IYP9 409 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 OR5AS1Q8N127 324 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 PNLDC1Q8NA58 520 aaKnown RBP11.3□□□□□ -0.6
SEC13-209ENST00000397117 OR6M1Q8NGM8 313 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 UBASH3BQ8TF42 649 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 TMEM171Q8WVE6 324 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 SPSB1Q96BD6 273 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 UQCC2Q9BRT2 126 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 METTL17Q9H7H0 456 aaPredicted RBP11.3□□□□□ -0.6
SEC13-209ENST00000397117 LIN7BQ9HAP6 207 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 AKIP1Q9NQ31 210 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 MRPL15Q9P015 296 aaKnown RBP11.3□□□□□ -0.6
SEC13-209ENST00000397117 ABRACLQ9P1F3 81 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 POU2F3Q9UKI9 436 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 FZR1Q9UM11 496 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 CMAHPQ9Y471 501 aa11.3□□□□□ -0.6
SEC13-209ENST00000397117 FAM230AA0A1W2PPH8 454 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 CTDSP2O14595 271 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 PLAUP00749 431 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 HTR2CP28335 458 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 THBS2P35442 1172 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 SELENOVP59797 346 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 DMRTC1Q5HYR2 192 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 ZNF611Q8N823 705 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 NUP37Q8NFH4 326 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 SYNPRQ8TBG9 265 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 TRMT10AQ8TBZ6 339 aaKnown RBP11.29□□□□□ -0.6
SEC13-209ENST00000397117 BORCS8Q96FH0 119 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 PLPPR2Q96GM1 343 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 SPACA5Q96QH8 159 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 TMEM204Q9BSN7 226 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 GPR160Q9UJ42 338 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 PURGQ9UJV8 347 aaKnown RBP11.29□□□□□ -0.6
SEC13-209ENST00000397117 MPC1Q9Y5U8 109 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 ATP23Q9Y6H3 246 aa11.29□□□□□ -0.6
SEC13-209ENST00000397117 HEATR1Q9H583 2144 aaKnown RBP11.28□□□□□ -0.6
SEC13-209ENST00000397117 A0A0B4J203 849 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 IQCF6A8MYZ5 107 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 CD3EP07766 207 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 CALCBP10092 127 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 SNRPBP14678 240 aaKnown RBP11.28□□□□□ -0.6
SEC13-209ENST00000397117 KITLGP21583 273 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 CA6P23280 308 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 CFPP27918 469 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 RBP2P50120 134 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 FUT6P51993 359 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 ATP5J2P56134 94 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 MTCP1P56278 107 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 CLDN12P56749 244 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 P2RY14Q15391 338 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 KISS1Q15726 138 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 NCMAPQ5T1S8 102 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 LHFPL2Q6ZUX7 228 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 KRT74Q7RTS7 529 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 MFSD4AQ8N468 514 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 S100ZQ8WXG8 99 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 NKX3-1Q99801 234 aaPredicted RBP11.28□□□□□ -0.6
SEC13-209ENST00000397117 CNTD2Q9H8S5 307 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 ABCB9Q9NP78 766 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 DUSP13Q9UII6 198 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 ADAM30Q9UKF2 790 aa11.28□□□□□ -0.6
SEC13-209ENST00000397117 RNF212BA8MTL3 300 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 VSTM5A8MXK1 200 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 HS3ST1O14792 307 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 HPGDSO60760 199 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 PAHP00439 452 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 CD37P11049 281 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 BMP4P12644 408 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 ZNF250P15622 560 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 CAPZA1P52907 286 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 ATP1B3P54709 279 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 KLF3P57682 345 aaPredicted RBP11.27□□□□□ -0.6
SEC13-209ENST00000397117 RIN1Q13671 783 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 CEACAM21Q3KPI0 293 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 C1orf100Q5SVJ3 147 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 ADAM5Q6NVV9 412 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 LAX1Q8IWV1 398 aa11.27□□□□□ -0.6
SEC13-209ENST00000397117 SAMD12Q8N8I0 201 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms