RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 FN1P02751 2386 aaKnown RBP17.5■□□□□ 0.39
SEC13-207ENST00000397105 PQLC2LA1A4F0 135 aa17.49■□□□□ 0.39
SEC13-207ENST00000397105 PTGES3LE9PB15 166 aa17.49■□□□□ 0.39
SEC13-207ENST00000397105 F5H0A9 414 aaPredicted RBP17.49■□□□□ 0.39
SEC13-207ENST00000397105 SLC1A7O00341 560 aa17.49■□□□□ 0.39
SEC13-207ENST00000397105 MUC1P15941 1255 aaPredicted RBP17.49■□□□□ 0.39
SEC13-207ENST00000397105 C21orf33P30042 268 aaPredicted RBP17.49■□□□□ 0.39
SEC13-207ENST00000397105 MICBQ29980 383 aa17.49■□□□□ 0.39
SEC13-207ENST00000397105 ESCO2Q56NI9 601 aa17.49■□□□□ 0.39
SEC13-207ENST00000397105 TEX36Q5VZQ5 186 aa17.49■□□□□ 0.39
SEC13-207ENST00000397105 HAGHLQ6PII5 290 aaPredicted RBP17.49■□□□□ 0.39
SEC13-207ENST00000397105 ADAT3Q96EY9 351 aaPredicted RBP17.49■□□□□ 0.39
SEC13-207ENST00000397105 NEIL1Q96FI4 390 aaPredicted RBP17.49■□□□□ 0.39
SEC13-207ENST00000397105 PDCD1LG2Q9BQ51 273 aa17.49■□□□□ 0.39
SEC13-207ENST00000397105 CDC42EP3Q9UKI2 254 aa17.49■□□□□ 0.39
SEC13-207ENST00000397105 RAB26Q9ULW5 256 aa17.49■□□□□ 0.39
SEC13-207ENST00000397105 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.48■□□□□ 0.391e-7■■□□□ 11.4
SEC13-207ENST00000397105 SRRM5B3KS81 715 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 CRLF1O75462 422 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 EGR1P18146 543 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 HAAOP46952 286 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 FUT6P51993 359 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 RIPPLY3P57055 190 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 LCN2P80188 198 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 UBE2V2Q15819 145 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 OR8B3Q8NGG8 313 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 OR51A4Q8NGJ6 313 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 OR10AC1Q8NH08 325 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 AQP3Q92482 292 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 C12orf43Q96C57 262 aaKnown RBP17.48■□□□□ 0.39
SEC13-207ENST00000397105 OR8B2Q96RD0 313 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 BEX2Q9BXY8 128 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 ERGIC3Q9Y282 383 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 LRCH1Q9Y2L9 728 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 TPRKBQ9Y3C4 175 aa17.48■□□□□ 0.39
SEC13-207ENST00000397105 FAM230AA0A1W2PPH8 454 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 MYL12BO14950 172 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 OGG1O15527 345 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 CDK1P06493 297 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 ZFP36P26651 326 aaKnown RBP17.47■□□□□ 0.39
SEC13-207ENST00000397105 CDK5R1Q15078 307 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 CNN3Q15417 329 aaKnown RBP17.47■□□□□ 0.39
SEC13-207ENST00000397105 CR1LQ2VPA4 569 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 FAM120AOSQ5T036 256 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 RNLSQ5VYX0 342 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 XAF1Q6GPH4 301 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 LYPD2Q6UXB3 125 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 UTS2BQ765I0 119 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 FAM90A1Q86YD7 464 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 ZNF485Q8NCK3 441 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 CNBD2Q96M20 576 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 SHARPINQ9H0F6 387 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 LPAR3Q9UBY5 353 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 DHDHQ9UQ10 334 aa17.47■□□□□ 0.39
SEC13-207ENST00000397105 IGHV3OR15-7A0A075B7D8 119 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 A0A0G2JMP0 313 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 A0A0X1KG70 313 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.46■□□□□ 0.39
SEC13-207ENST00000397105 J3QT63 122 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 TNFRSF13BO14836 293 aaPredicted RBP17.46■□□□□ 0.39
SEC13-207ENST00000397105 AKR7A2O43488 359 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 RHBDL1O75783 438 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 GYPAP02724 150 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 HNF1AP20823 631 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 GATA3P23771 443 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 PITPNBP48739 271 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 GMFBP60983 142 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 SEC61A1P61619 476 aaKnown RBP17.46■□□□□ 0.39
SEC13-207ENST00000397105 CHRFAM7AQ494W8 412 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 FAHD2BQ6P2I3 314 aaPredicted RBP17.46■□□□□ 0.39
SEC13-207ENST00000397105 NANOGP1Q8N7R0 232 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 OR4M2Q8NGB6 313 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 TRMT10AQ8TBZ6 339 aaKnown RBP17.46■□□□□ 0.39
SEC13-207ENST00000397105 NPRL2Q8WTW4 380 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 TSEN15Q8WW01 171 aaKnown RBP17.46■□□□□ 0.39
SEC13-207ENST00000397105 FAHD2AQ96GK7 314 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 SSBP3Q9BWW4 388 aaPredicted RBP17.46■□□□□ 0.39
SEC13-207ENST00000397105 DNAJB11Q9UBS4 358 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 POLDIP2Q9Y2S7 368 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 PCDHGB5Q9Y5G0 923 aa17.46■□□□□ 0.39
SEC13-207ENST00000397105 ABCA2Q9BZC7 2435 aa17.46■□□□□ 0.38
SEC13-207ENST00000397105 SVEP1Q4LDE5 3571 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 PPIAL4CA0A0B4J2A2 164 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 A8MXK9 166 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 PHF1O43189 567 aaPredicted RBP17.45■□□□□ 0.38
SEC13-207ENST00000397105 ADAM20O43506 726 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 OCM2P0CE71 109 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 OCMP0CE72 109 aaPredicted RBP17.45■□□□□ 0.38
SEC13-207ENST00000397105 ATF1P18846 271 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 PRKACBP22694 351 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 GLRA1P23415 457 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 WNT4P56705 351 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 TAS2R43P59537 309 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 GNB2P62879 340 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 DNAAF1Q8NEP3 725 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 OR5D14Q8NGL3 314 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 RPS4Y2Q8TD47 263 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 GPR148Q8TDV2 347 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 SMIM19Q96E16 107 aa17.45■□□□□ 0.38
SEC13-207ENST00000397105 BORCS8Q96FH0 119 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms