RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 ZNF728P0DKX0 622 aa12.97□□□□□ -0.33
CCNF-202ENST00000397066 FHITP49789 147 aa12.97□□□□□ -0.33
CCNF-202ENST00000397066 ECH1Q13011 328 aa12.97□□□□□ -0.33
CCNF-202ENST00000397066 PLXDC1Q8IUK5 500 aa12.97□□□□□ -0.33
CCNF-202ENST00000397066 SERPINE3A8MV23 424 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 C1QL1O75973 258 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 CD5P06127 495 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 MTCP1P56278 107 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 RAB2AP61019 212 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 GNMTQ14749 295 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 TMEM182Q6ZP80 229 aaPredicted RBP12.96□□□□□ -0.33
CCNF-202ENST00000397066 SUMF2Q8NBJ7 301 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 OR5L1Q8NGL2 311 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 RBM24Q9BX46 236 aaKnown RBP12.96□□□□□ -0.33
CCNF-202ENST00000397066 C8orf33Q9H7E9 229 aaPredicted RBP12.96□□□□□ -0.33
CCNF-202ENST00000397066 FGF21Q9NSA1 209 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 ZNF319Q9P2F9 582 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 CEP290O15078 2479 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 E5RGE8 158 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 GSN-AS1Q9NRJ2 163 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 NSG2Q9Y328 171 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 UNC13CQ8NB66 2214 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 A0A1W2PPE2 198 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 FAM221AA4D161 298 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 DUX1O43812 170 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 MYF5P13349 255 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 RAB5AP20339 215 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 CHATP28329 748 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 TAF9Q16594 264 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 SOHLH1Q5JUK2 328 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 TSPO2Q5TGU0 170 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 SLC38A9Q8NBW4 561 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 ERGIC1Q969X5 290 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 C19orf12Q9NSK7 152 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 KLHL13Q9P2N7 655 aa12.96□□□□□ -0.33
CCNF-202ENST00000397066 DEDDO75618 318 aa12.96□□□□□ -0.34
CCNF-202ENST00000397066 GRB2P62993 217 aaKnown RBP12.96□□□□□ -0.34
CCNF-202ENST00000397066 CLINT1Q14677 625 aa12.96□□□□□ -0.34
CCNF-202ENST00000397066 C14orf28Q4W4Y0 310 aa12.96□□□□□ -0.34
CCNF-202ENST00000397066 STT3BQ8TCJ2 826 aa12.96□□□□□ -0.34
CCNF-202ENST00000397066 CHRDQ9H2X0 955 aa12.96□□□□□ -0.34
CCNF-202ENST00000397066 FBLN5Q9UBX5 448 aa12.96□□□□□ -0.34
CCNF-202ENST00000397066 MED12Q93074 2177 aa12.96□□□□□ -0.34
CCNF-202ENST00000397066 OMGP23515 440 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 RGS19P49795 217 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 RRADP55042 308 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 FAM180AQ6UWF9 173 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 PLEK2Q9NYT0 353 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 CHD9Q3L8U1 2897 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 ANGPTL7O43827 346 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 NAT2P11245 290 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 S100PP25815 95 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 S100A2P29034 98 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 DLX2Q07687 328 aaPredicted RBP12.95□□□□□ -0.34
CCNF-202ENST00000397066 NCMAPQ5T1S8 102 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 PLXDC2Q6UX71 529 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 REEP6Q96HR9 211 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 GPR173Q9NS66 373 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 HNRNPKP61978 463 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCNF-202ENST00000397066 SURF2Q15527 256 aaPredicted RBP12.95□□□□□ -0.34
CCNF-202ENST00000397066 RNF212Q495C1 297 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 OR1J1Q8NGS3 322 aa12.95□□□□□ -0.34
CCNF-202ENST00000397066 RTN4IP1Q8WWV3 396 aaPredicted RBP12.95□□□□□ -0.34
CCNF-202ENST00000397066 OR2C1O95371 312 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 NME1P15531 152 aaKnown RBP12.94□□□□□ -0.34
CCNF-202ENST00000397066 ECI1P42126 302 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 SULT1A1P50225 295 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 HERV-K104P61576 105 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 WDSUB1Q8N9V3 476 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 MESP1Q9BRJ9 268 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 FAAP24Q9BTP7 215 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 SLC33A1O00400 549 aaPredicted RBP12.94□□□□□ -0.34
CCNF-202ENST00000397066 GAPDHP04406 335 aaKnown RBP12.94□□□□□ -0.34
CCNF-202ENST00000397066 OR5AC1P0C628 307 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 LYL1P12980 280 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 CSNK1A1P48729 337 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 FAM3AP98173 230 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 RTL6Q6ICC9 239 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 SLC22A8Q8TCC7 542 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 JSRP1Q96MG2 331 aaPredicted RBP12.94□□□□□ -0.34
CCNF-202ENST00000397066 PCNX3Q9H6A9 2034 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 DHRS7CA6NNS2 312 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 SLC35A1P78382 337 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 SPIN3Q5JUX0 258 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 BRICD5Q6PL45 260 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 C20orf196Q8IYI0 205 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 SPAG17Q6Q759 2223 aa12.94□□□□□ -0.34
CCNF-202ENST00000397066 IGKV1-9A0A0C4DH69 117 aa12.93□□□□□ -0.34
CCNF-202ENST00000397066 CCDC163A0A0D9SF12 145 aa12.93□□□□□ -0.34
CCNF-202ENST00000397066 A0A1W2PPE3 182 aa12.93□□□□□ -0.34
CCNF-202ENST00000397066 C5orf52A6NGY3 159 aa12.93□□□□□ -0.34
CCNF-202ENST00000397066 EFNA3P52797 238 aa12.93□□□□□ -0.34
CCNF-202ENST00000397066 KIAA0141Q14154 515 aaPredicted RBP12.93□□□□□ -0.34
CCNF-202ENST00000397066 PPA1Q15181 289 aa12.93□□□□□ -0.34
CCNF-202ENST00000397066 ZNF674Q2M3X9 581 aa12.93□□□□□ -0.34
CCNF-202ENST00000397066 TMEM268Q5VZI3 342 aa12.93□□□□□ -0.34
CCNF-202ENST00000397066 LHFPL1Q86WI0 220 aa12.93□□□□□ -0.34
CCNF-202ENST00000397066 NECAP2Q9NVZ3 263 aa12.93□□□□□ -0.34
CCNF-202ENST00000397066 CCDC85CA6NKD9 419 aa12.93□□□□□ -0.34
CCNF-202ENST00000397066 PHF1O43189 567 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms