RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 SLC25A47Q6Q0C1 308 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 SLC16A14Q7RTX9 510 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 FAM71E2Q8N5Q1 922 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 PLPP5Q8NEB5 264 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 CSNK2A3Q8NEV1 391 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 NOXO1Q8NFA2 376 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 OR8U1Q8NH10 309 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 C14orf79Q96F83 325 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 AKR1E2Q96JD6 320 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 C5orf34Q96MH7 638 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 FSCN3Q9NQT6 498 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 EHFQ9NZC4 300 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 GSKIPQ9P0R6 139 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 METTL1Q9UBP6 276 aaKnown RBP11.7□□□□□ -0.54
TRIM40-207ENST00000396581 FBXL17Q9UF56 701 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 PHF3Q92576 2039 aaKnown RBP11.7□□□□□ -0.54
TRIM40-207ENST00000396581 SDCBPO00560 298 aaPredicted RBP11.69□□□□□ -0.54
TRIM40-207ENST00000396581 HTR3BO95264 441 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 CFIP05156 583 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 HCKP08631 526 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 FBLP22087 321 aaKnown RBP11.69□□□□□ -0.54
TRIM40-207ENST00000396581 SNCAP37840 140 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 ARL4DP49703 201 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 RNF4P78317 190 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 GABREP78334 506 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 FOXF1Q12946 379 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 ARL6IP1Q15041 203 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 EIF2S3LQ2VIR3 472 aaKnown RBP11.69□□□□□ -0.54
TRIM40-207ENST00000396581 RTL6Q6ICC9 239 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 ETV3LQ6ZN32 361 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 RABEPKQ7Z6M1 372 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 OR9K2Q8NGE7 335 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 SLC25A43Q8WUT9 341 aaPredicted RBP11.69□□□□□ -0.54
TRIM40-207ENST00000396581 PRRX2Q99811 253 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 PECRQ9BY49 303 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 WDR87Q6ZQQ6 2873 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 EFNA2O43921 213 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 IGHV2-5P01817 119 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 HPNP05981 417 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 CTSDP07339 412 aaPredicted RBP11.69□□□□□ -0.54
TRIM40-207ENST00000396581 CPT2P23786 658 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 FCGR2CP31995 323 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 ID4P47928 161 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 SUCLG1P53597 346 aaKnown RBP11.69□□□□□ -0.54
TRIM40-207ENST00000396581 IAH1Q2TAA2 248 aaPredicted RBP11.69□□□□□ -0.54
TRIM40-207ENST00000396581 Q6ZSR3 168 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 OR2AJ1Q8NGZ0 328 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 OR1L3Q8NH93 324 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 NANPQ8TBE9 248 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 SECTM1Q8WVN6 248 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 MALSU1Q96EH3 234 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 NUDT22Q9BRQ3 303 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 NAA11Q9BSU3 229 aaPredicted RBP11.69□□□□□ -0.54
TRIM40-207ENST00000396581 ST6GALNAC5Q9BVH7 336 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 PLEKHA2Q9HB19 425 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 PPP4R1LQ9P1A2 415 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 EDARQ9UNE0 448 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 C14orf166Q9Y224 244 aaKnown RBP11.69□□□□□ -0.54
TRIM40-207ENST00000396581 FRYLO94915 3013 aa11.69□□□□□ -0.54
TRIM40-207ENST00000396581 VSTM2BA6NLU5 285 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 AGPAT2O15120 278 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 SFTPBP07988 381 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 SEC11BP0C7V7 166 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 DANCRP0C864 163 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 FOLR1P15328 257 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 RBMXP38159 391 aaKnown RBP11.68□□□□□ -0.54
TRIM40-207ENST00000396581 TMEM33P57088 247 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 ACY1Q03154 408 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 SMCO1Q147U7 214 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 HIST3H3Q16695 136 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 GUSBP11Q6P575 273 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 FAM219AQ8IW50 185 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 OR51T1Q8NGJ9 327 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 TCEAL7Q9BRU2 100 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 WDFY4Q6ZS81 3184 aa11.68□□□□□ -0.54
TRIM40-207ENST00000396581 CRYM-AS1A6NIL9 109 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 LINC00587B1AMM8 73 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 TRAF3IP2O43734 574 aaPredicted RBP11.67□□□□□ -0.54
TRIM40-207ENST00000396581 IGHG1P01857 330 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 GLAP06280 429 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 FABP1P07148 127 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 MAS1LP35410 378 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 FBXW4P57775 412 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 CLRN1P58418 232 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 MFAP5Q13361 173 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 KISS1Q15726 138 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 ZNF239Q16600 458 aaKnown RBP11.67□□□□□ -0.54
TRIM40-207ENST00000396581 SLC23A3Q6PIS1 610 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 ZNF574Q6ZN55 896 aaPredicted RBP11.67□□□□□ -0.54
TRIM40-207ENST00000396581 LANCL3Q6ZV70 420 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 C1QL2Q7Z5L3 287 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 PNLDC1Q8NA58 520 aaKnown RBP11.67□□□□□ -0.54
TRIM40-207ENST00000396581 FNDC9Q8TBE3 224 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 FAM71F1Q96KD3 344 aaPredicted RBP11.67□□□□□ -0.54
TRIM40-207ENST00000396581 MRGPRX4Q96LA9 322 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 FAM212BQ9NTI7 297 aaPredicted RBP11.67□□□□□ -0.54
TRIM40-207ENST00000396581 ASCC3Q8N3C0 2202 aaKnown RBP11.67□□□□□ -0.54
TRIM40-207ENST00000396581 A0A1W2PQM1 296 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 C7orf77A4D0Y5 90 aa11.67□□□□□ -0.54
TRIM40-207ENST00000396581 C2orf72A6NCS6 295 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms