RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 KTI12Q96EK9 354 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 DHRS9Q9BPW9 319 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 PARP12Q9H0J9 701 aaKnown RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 TNFRSF12AQ9NP84 129 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 LSM2Q9Y333 95 aaKnown RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 IGHV5-51A0A0C4DH38 117 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 PPM1DO15297 605 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 FGF2P09038 288 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 C21orf58P58505 322 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 CLPPQ16740 277 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 GPBAR1Q8TDU6 330 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 NUDT8Q8WV74 236 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 FBXW5Q969U6 566 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 J3QR89 54 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 RAC3P60763 192 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 RANP62826 216 aaKnown RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 RAE1P78406 368 aaKnown RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 HTRA4P83105 476 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 HYAL1Q12794 435 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 WDR74Q6RFH5 385 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 OR13D1Q8NGV5 346 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 ZDHHC16Q969W1 377 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 AKR1E2Q96JD6 320 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 MRGPRX3Q96LB0 322 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 GNRHR2Q96P88 292 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 WDR61Q9GZS3 305 aaKnown RBP4.89□□□□□ -1.63
VPS13C-204ENST00000395898 RAB1BQ9H0U4 201 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 TRPM7Q96QT4 1865 aa4.89□□□□□ -1.63
VPS13C-204ENST00000395898 TRIM77I1YAP6 450 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 LINC01565O15544 149 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF17P17021 662 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 SRD5A2P31213 254 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 TEX261Q6UWH6 196 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 RAB40CQ96S21 281 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 GAL3ST2Q9H3Q3 398 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 P4HTMQ9NXG6 502 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 U3KQ87 197 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 TPRP12270 2363 aaKnown RBP4.88□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF831Q5JPB2 1677 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 WDR81Q562E7 1941 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 SPRY3O43610 288 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 DCTDP32321 178 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 CEACAM6P40199 344 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 OR2B8PP59922 312 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 C12orf73Q69YU5 71 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF574Q6ZN55 896 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-204ENST00000395898 ASCL5Q7RTU5 278 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 MOB3BQ86TA1 216 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 BCL2L2Q92843 193 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-204ENST00000395898 COX14Q96I36 57 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-204ENST00000395898 OR5B21A6NL26 309 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 RFPL4AA6NLU0 287 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 RFPL4AL1F8VTS6 287 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 BCL2L11O43521 198 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 ICMTO60725 284 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 DUS4LO95620 317 aaKnown RBP4.88□□□□□ -1.63
VPS13C-204ENST00000395898 OPRK1P41145 380 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 C1orf53Q5VUE5 145 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 GUSBP11Q6P575 273 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 MAMSTRQ6ZN01 415 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 OR4C3Q8NH37 302 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 WDR89Q96FK6 387 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-204ENST00000395898 ONECUT1Q9UBC0 465 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 ACER2Q5QJU3 275 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 GLDNQ6ZMI3 551 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-204ENST00000395898 NUBPLQ8TB37 319 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 RPUSD4Q96CM3 377 aaKnown RBP4.88□□□□□ -1.63
VPS13C-204ENST00000395898 PTDSS2Q9BVG9 487 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 MFRPQ9BY79 579 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 SRRQ9GZT4 340 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 FUCA1P04066 466 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 CPN1P15169 458 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 IGFBP6P24592 240 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-204ENST00000395898 S100A4P26447 101 aaKnown RBP4.88□□□□□ -1.63
VPS13C-204ENST00000395898 CALCRP30988 508 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 MPLP40238 635 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 P2RX3P56373 397 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM215Q68D42 235 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 IAPPP10997 89 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 RFC3P40938 356 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 CNN1P51911 297 aaKnown RBP4.88□□□□□ -1.63
VPS13C-204ENST00000395898 SSX8Q7RTT4 187 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 OR5M9Q8NGP3 310 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 ST8SIA2Q92186 375 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 MMP26Q9NRE1 261 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 BOLA1Q9Y3E2 137 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 KCNE3Q9Y6H6 103 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 SBK3P0C264 359 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 HMGA2P52926 109 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 SNRPNP63162 240 aaKnown RBP4.88□□□□□ -1.63
VPS13C-204ENST00000395898 KIAA0040Q15053 153 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 BTLAQ7Z6A9 289 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 OR10D3Q8NH80 312 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 AKR7LQ8NHP1 331 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 EXTL1Q92935 676 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF707Q96C28 371 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-204ENST00000395898 SPNS1Q9H2V7 528 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 NTN4Q9HB63 628 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 TRAPPC4Q9Y296 219 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms