RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 DHRS2Q13268 280 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 BPIFCQ8NFQ6 507 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 NANPQ8TBE9 248 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 ARHGAP5-AS1Q96IT6 56 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 TSNAXQ99598 290 aaKnown RBP12.18□□□□□ -0.46
SNCA-204ENST00000394989 NKX6-2Q9C056 277 aaPredicted RBP12.18□□□□□ -0.46
SNCA-204ENST00000394989 MFFQ9GZY8 342 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 IL17BQ9UHF5 180 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 MED13Q9UHV7 2174 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 FOXI3A8MTJ6 420 aaPredicted RBP12.18□□□□□ -0.46
SNCA-204ENST00000394989 F5H5P2 479 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 FGF2P09038 288 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 PRSS12P56730 875 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 CEACAM16Q2WEN9 425 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 KRTAP27-1Q3LI81 207 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 FAM89BQ8N5H3 189 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 AKR7LQ8NHP1 331 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 CCDC107Q8WV48 283 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 PP6455Q8WZ26 134 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 CPNE4Q96A23 557 aaPredicted RBP12.18□□□□□ -0.46
SNCA-204ENST00000394989 PRRT1Q99946 306 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 ANAPC10Q9UM13 185 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 KNTC1P50748 2209 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 OR6C6A6NF89 314 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 MFNGO00587 321 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 RPS27AP62979 156 aaKnown RBP12.17□□□□□ -0.46
SNCA-204ENST00000394989 IKZF1Q13422 519 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 TMEM164Q5U3C3 297 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 HAGHLQ6PII5 290 aaPredicted RBP12.17□□□□□ -0.46
SNCA-204ENST00000394989 PIGTQ969N2 578 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 FOXB1Q99853 325 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 TMEM231Q9H6L2 316 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 PLA2G3Q9NZ20 509 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 BOKQ9UMX3 212 aaPredicted RBP12.17□□□□□ -0.46
SNCA-204ENST00000394989 PMP2P02689 132 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 GSTP1P09211 210 aaKnown RBP12.17□□□□□ -0.46
SNCA-204ENST00000394989 LHX2P50458 406 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 PSG4Q00888 419 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 EIF3IQ13347 325 aaKnown RBP12.17□□□□□ -0.46
SNCA-204ENST00000394989 ABHD17BQ5VST6 288 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 ZNF660Q6AZW8 331 aaPredicted RBP12.17□□□□□ -0.46
SNCA-204ENST00000394989 JMJD6Q6NYC1 403 aaPredicted RBP12.17□□□□□ -0.46
SNCA-204ENST00000394989 DRAM2Q6UX65 266 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 SLC16A13Q7RTY0 426 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 SULF2Q8IWU5 870 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 OR1F12Q8NHA8 337 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 HAS2Q92819 552 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 FAM173AQ9BQD7 235 aa12.17□□□□□ -0.46
SNCA-204ENST00000394989 ZNF230Q9UIE0 474 aaPredicted RBP12.17□□□□□ -0.46
SNCA-204ENST00000394989 APOC1P02654 83 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 UBBP0CG47 229 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 FCGR2AP12318 317 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 MPPED2Q15777 294 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 MICBQ29980 383 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 RIPPLY2Q5TAB7 128 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 C12orf45Q8N5I9 185 aaPredicted RBP12.16□□□□□ -0.46
SNCA-204ENST00000394989 CST11Q9H112 138 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 OR10A2Q9H208 303 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 GPR35Q9HC97 309 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 LINC00587B1AMM8 73 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 IGHV3-9P01782 118 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 HPNP05981 417 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 ZNF806P0C7X5 589 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 OR1C1Q15619 314 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 HES3Q5TGS1 186 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 SLC16A14Q7RTX9 510 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 SLC25A42Q86VD7 318 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 SKA3Q8IX90 412 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 PNLDC1Q8NA58 520 aaKnown RBP12.16□□□□□ -0.46
SNCA-204ENST00000394989 OR56B1Q8NGI3 324 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 CPNE2Q96FN4 548 aaPredicted RBP12.16□□□□□ -0.46
SNCA-204ENST00000394989 ZNF75AQ96N20 296 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 HLA-AP01891 365 aaKnown RBP12.16□□□□□ -0.46
SNCA-204ENST00000394989 MGMTP16455 207 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 ITGA3P26006 1051 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 MAGEA5P43359 124 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 CLDN18P56856 261 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 LINC00696Q6ZRV3 163 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 LINC00469Q8N7U9 141 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 PXT1Q8NFP0 134 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 OR4K15Q8NH41 348 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 C10orf35Q96D05 121 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 REEP6Q96HR9 211 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 SEC22AQ96IW7 307 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 WNT5BQ9H1J7 359 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 PLEKHA6Q9Y2H5 1048 aa12.16□□□□□ -0.46
SNCA-204ENST00000394989 KMT2EQ8IZD2 1858 aa12.15□□□□□ -0.46
SNCA-204ENST00000394989 ZBTB25P24278 435 aa12.15□□□□□ -0.46
SNCA-204ENST00000394989 LUMP51884 338 aaPredicted RBP12.15□□□□□ -0.46
SNCA-204ENST00000394989 SRYQ05066 204 aa12.15□□□□□ -0.46
SNCA-204ENST00000394989 PPP1R1AQ13522 171 aa12.15□□□□□ -0.46
SNCA-204ENST00000394989 GUCA2BQ16661 112 aa12.15□□□□□ -0.46
SNCA-204ENST00000394989 ADAD2Q8NCV1 583 aaKnown RBP12.15□□□□□ -0.46
SNCA-204ENST00000394989 SEMA6DQ8NFY4 1073 aa12.15□□□□□ -0.46
SNCA-204ENST00000394989 OR51T1Q8NGJ9 327 aa12.15□□□□□ -0.46
SNCA-204ENST00000394989 TTTY12Q9BZ98 90 aa12.15□□□□□ -0.46
SNCA-204ENST00000394989 OR2H1Q9GZK4 316 aa12.15□□□□□ -0.46
SNCA-204ENST00000394989 GPR173Q9NS66 373 aa12.15□□□□□ -0.46
SNCA-204ENST00000394989 GLS2Q9UI32 602 aa12.15□□□□□ -0.46
SNCA-204ENST00000394989 TTC28Q96AY4 2481 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms