RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 OGG1O15527 345 aa16.66■□□□□ 0.26
SNCA-203ENST00000394986 AKR7A2O43488 359 aa16.66■□□□□ 0.26
SNCA-203ENST00000394986 MT-ND2P03891 347 aa16.66■□□□□ 0.26
SNCA-203ENST00000394986 HAAOP46952 286 aa16.66■□□□□ 0.26
SNCA-203ENST00000394986 WNT4P56705 351 aa16.66■□□□□ 0.26
SNCA-203ENST00000394986 LYPD2Q6UXB3 125 aa16.66■□□□□ 0.26
SNCA-203ENST00000394986 OR13C5Q8NGS8 318 aa16.66■□□□□ 0.26
SNCA-203ENST00000394986 AQP3Q92482 292 aa16.66■□□□□ 0.26
SNCA-203ENST00000394986 C10orf35Q96D05 121 aa16.66■□□□□ 0.26
SNCA-203ENST00000394986 SMIM19Q96E16 107 aa16.66■□□□□ 0.26
SNCA-203ENST00000394986 WDR13Q9H1Z4 485 aa16.66■□□□□ 0.26
SNCA-203ENST00000394986 DUSP21Q9H596 190 aa16.66■□□□□ 0.26
SNCA-203ENST00000394986 ERGIC3Q9Y282 383 aa16.66■□□□□ 0.26
SNCA-203ENST00000394986 IGKV1-27A0A075B6S5 117 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 IGKV1-9A0A0C4DH69 117 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 OOEPA6NGQ2 149 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 B4DSR2 109 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 SYNGR1O43759 233 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 GATBO75879 557 aaKnown RBP16.65■□□□□ 0.26
SNCA-203ENST00000394986 RPS2P15880 293 aaKnown RBP16.65■□□□□ 0.26
SNCA-203ENST00000394986 SOX2P48431 317 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 DMKNQ6E0U4 476 aaPredicted RBP16.65■□□□□ 0.26
SNCA-203ENST00000394986 FAM166AQ6J272 317 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 ANGPTL5Q86XS5 388 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 FAM90A1Q86YD7 464 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 PP6455Q8WZ26 134 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 OR5M11Q96RB7 305 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 CDCA4Q9BXL8 241 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 SLC7A11Q9UPY5 501 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 DHDHQ9UQ10 334 aa16.65■□□□□ 0.26
SNCA-203ENST00000394986 HIVEP2P31629 2446 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 A8MV72 311 aaPredicted RBP16.64■□□□□ 0.25
SNCA-203ENST00000394986 SRRM5B3KS81 715 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 F5H0A9 414 aaPredicted RBP16.64■□□□□ 0.25
SNCA-203ENST00000394986 RGS10O43665 173 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 PLPP2O43688 288 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 SERPINA3P01011 423 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 GYPAP02724 150 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 MSMBP08118 114 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 ZFP36P26651 326 aaKnown RBP16.64■□□□□ 0.25
SNCA-203ENST00000394986 LCN2P80188 198 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 IRF3Q14653 427 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 RNLSQ5VYX0 342 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 CALHM1Q8IU99 346 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 BATF2Q8N1L9 274 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 OR13C9Q8NGT0 318 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 OR10Z1Q8NGY1 313 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 GHSRQ92847 366 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 ZNF488Q96MN9 340 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 MND1Q9BWT6 205 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 CCDC90BQ9GZT6 254 aa16.64■□□□□ 0.25
SNCA-203ENST00000394986 LSM2Q9Y333 95 aaKnown RBP16.64■□□□□ 0.25
SNCA-203ENST00000394986 YLPM1P49750 1951 aaKnown RBP16.64■□□□□ 0.25
SNCA-203ENST00000394986 FN1P02751 2386 aaKnown RBP16.64■□□□□ 0.25
SNCA-203ENST00000394986 DENRO43583 198 aaKnown RBP16.63■□□□□ 0.25
SNCA-203ENST00000394986 FSTL3O95633 263 aa16.63■□□□□ 0.25
SNCA-203ENST00000394986 PLATP00750 562 aa16.63■□□□□ 0.25
SNCA-203ENST00000394986 WNT2P09544 360 aa16.63■□□□□ 0.25
SNCA-203ENST00000394986 ATF1P18846 271 aa16.63■□□□□ 0.25
SNCA-203ENST00000394986 CFHR2P36980 270 aa16.63■□□□□ 0.25
SNCA-203ENST00000394986 CNN3Q15417 329 aaKnown RBP16.63■□□□□ 0.25
SNCA-203ENST00000394986 RBM48Q5RL73 367 aaKnown RBP16.63■□□□□ 0.25
SNCA-203ENST00000394986 UTS2BQ765I0 119 aa16.63■□□□□ 0.25
SNCA-203ENST00000394986 OR51F2Q8NH61 342 aa16.63■□□□□ 0.25
SNCA-203ENST00000394986 PGLYRP3Q96LB9 341 aa16.63■□□□□ 0.25
SNCA-203ENST00000394986 Q9H521 79 aa16.63■□□□□ 0.25
SNCA-203ENST00000394986 SNTG1Q9NSN8 517 aa16.63■□□□□ 0.25
SNCA-203ENST00000394986 KCNS2Q9ULS6 477 aa16.63■□□□□ 0.25
SNCA-203ENST00000394986 ZNF281Q9Y2X9 895 aa16.63■□□□□ 0.25
SNCA-203ENST00000394986 SONP18583 2426 aaKnown RBP16.63■□□□□ 0.25
SNCA-203ENST00000394986 TRAV38-1A0A0B4J264 116 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 J3QT63 122 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 PHF1O43189 567 aaPredicted RBP16.62■□□□□ 0.25
SNCA-203ENST00000394986 TFF1P04155 84 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 AZGP1P25311 298 aaKnown RBP16.62■□□□□ 0.25
SNCA-203ENST00000394986 TAS2R43P59537 309 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 TEX36Q5VZQ5 186 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 DCDC5Q6ZRR9 648 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 RNF144BQ7Z419 303 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 ZNF573Q86YE8 665 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 GPR148Q8TDV2 347 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 BORCS8Q96FH0 119 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 SPACA5Q96QH8 159 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 HIF1ANQ9NWT6 349 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 CTSZQ9UBR2 303 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 A0A1B0GW55 424 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 DUX4L2P0CJ85 424 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 DUX4L3P0CJ86 424 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 DUX4L4P0CJ87 422 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 DUX4L5P0CJ88 424 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 DUX4L6P0CJ89 424 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 DUX4L7P0CJ90 424 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 CELP19835 753 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 MAP2K4P45985 399 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 FUT6P51993 359 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 ASPHD2Q6ICH7 369 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 DUX4L9Q6RFH8 374 aaPredicted RBP16.62■□□□□ 0.25
SNCA-203ENST00000394986 IL17RELQ6ZVW7 336 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 GLCCI1Q86VQ1 547 aa16.62■□□□□ 0.25
SNCA-203ENST00000394986 OR5T2Q8NGG2 359 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms