RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 RAB27BO00194 218 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 CBR3O75828 277 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 ITGB2P05107 769 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 H2AFB1P0C5Y9 115 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 FGF5P12034 268 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 HOXB9P17482 250 aaPredicted RBP5.07□□□□□ -1.6
RFFL-202ENST00000394597 CLDN17P56750 224 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 SPIN3Q5JUX0 258 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 HES3Q5TGS1 186 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 JMJD6Q6NYC1 403 aaPredicted RBP5.07□□□□□ -1.6
RFFL-202ENST00000394597 STAC2Q6ZMT1 411 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 TMPPEQ6ZT21 453 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 ZNF429Q86V71 674 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 MAML2Q8IZL2 1156 aaPredicted RBP5.07□□□□□ -1.6
RFFL-202ENST00000394597 ARIH2OSQ8N7S6 290 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 TMEM178AQ8NBL3 297 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 PLPP7Q8NBV4 271 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 CCDC54Q8NEL0 328 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 OR4D6Q8NGJ1 314 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 ZNF721Q8TF20 911 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 C22orf15Q8WYQ4 148 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 HSD17B8Q92506 261 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 CORO2AQ92828 525 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 TECTBQ96PL2 329 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 WDR76Q9H967 626 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 WDR54Q9H977 334 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 ELOVL3Q9HB03 270 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.07□□□□□ -1.6
RFFL-202ENST00000394597 P4HTMQ9NXG6 502 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 OR5V1Q9UGF6 321 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 SIGLEC7Q9Y286 467 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 DOCK8Q8NF50 2099 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 LOC102724200A0A096LPH7 203 aaPredicted RBP5.07□□□□□ -1.6
RFFL-202ENST00000394597 A0A1W2PQD3 144 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 MEX3AA1L020 520 aaKnown RBP5.07□□□□□ -1.6
RFFL-202ENST00000394597 PRAMEF27A3QJZ7 478 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 H7BYZ3 331 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 MPIG6BO95866 241 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 CST4P01036 141 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 HBE1P02100 147 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 CYC1P08574 325 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 FAM157BP0CG42 384 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 DIO1P49895 249 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 PPP1R1AQ13522 171 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 HNF4GQ14541 408 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 ZNF74Q16587 644 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 GLYATL3Q5SZD4 288 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 KCNIP4Q6PIL6 250 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 C16orf47Q6ZP98 133 aaPredicted RBP5.07□□□□□ -1.6
RFFL-202ENST00000394597 DPY19L4Q7Z388 723 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 C11orf42Q8N5U0 333 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 TMEM104Q8NE00 496 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 OR2G3Q8NGZ4 309 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 M1APQ8TC57 530 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 SLC25A28Q96A46 364 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 CTHRC1Q96CG8 243 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 URM1Q9BTM9 101 aaKnown RBP5.07□□□□□ -1.6
RFFL-202ENST00000394597 LANCL2Q9NS86 450 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 C20orf141Q9NUB4 165 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 SPTAN1Q13813 2472 aaKnown RBP5.07□□□□□ -1.6
RFFL-202ENST00000394597 NUP210Q8TEM1 1887 aaPredicted RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 CNOT1A5YKK6 2376 aaKnown RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 MED19A0JLT2 244 aaPredicted RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 OR6C6A6NF89 314 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 PRR19A6NJB7 356 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 ZFP92A6NM28 416 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 VAMP5O95183 116 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 TRGC2P03986 189 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 SERPINA7P05543 415 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 PI3P19957 117 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 OR3A1P47881 315 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 NOVA1P51513 510 aaKnown RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 RANP62826 216 aaKnown RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 GABREP78334 506 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 MRPS34P82930 218 aaKnown RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 PPA1Q15181 289 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 ACKR1Q16570 336 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 SLC25A30Q5SVS4 291 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 CBLN3Q6UW01 205 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 DHRS11Q6UWP2 260 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 COX15Q7KZN9 410 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 SULF2Q8IWU5 870 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 OR10G3Q8NGC4 313 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 SOSTQ9BQB4 213 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 ULBP2Q9BZM5 246 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 B3GALT5Q9Y2C3 310 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 DTX4Q9Y2E6 619 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 STRAPQ9Y3F4 350 aaKnown RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 C19orf67A6NJJ6 358 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 CLDN34H7C241 214 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 HOXA5P20719 270 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 HSF1Q00613 529 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 TNFRSF9Q07011 255 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 FUT5Q11128 374 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 PYY3Q5JQD4 70 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 FHL5Q5TD97 284 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 FBXW12Q6X9E4 464 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 AAED1Q7RTV5 226 aa5.06□□□□□ -1.6
RFFL-202ENST00000394597 YRDCQ86U90 279 aaKnown RBP5.06□□□□□ -1.6
RFFL-202ENST00000394597 TMEM123Q8N131 208 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms