RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 RAB26Q9ULW5 256 aa15.9■□□□□ 0.14
PDLIM7-204ENST00000393546 FN1P02751 2386 aaKnown RBP15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 SRRM5B3KS81 715 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 SLC1A7O00341 560 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 ZFPL1O95159 310 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 EGR1P18146 543 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 C21orf33P30042 268 aaPredicted RBP15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 FUT6P51993 359 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 RIPPLY3P57055 190 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 UBE2V2Q15819 145 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 MICBQ29980 383 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 ESCO2Q56NI9 601 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 TEX36Q5VZQ5 186 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 HAGHLQ6PII5 290 aaPredicted RBP15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 NLRC3Q7RTR2 1065 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 OR8B3Q8NGG8 313 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 OR10AC1Q8NH08 325 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 ADAT3Q96EY9 351 aaPredicted RBP15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 OR8B2Q96RD0 313 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 PDCD1LG2Q9BQ51 273 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 CHST5Q9GZS9 411 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 TPRKBQ9Y3C4 175 aa15.89■□□□□ 0.13
PDLIM7-204ENST00000393546 FAM230AA0A1W2PPH8 454 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 PQLC2LA1A4F0 135 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 OGG1O15527 345 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 CRLF1O75462 422 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 CDK1P06493 297 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 MUC1P15941 1255 aaPredicted RBP15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 HAAOP46952 286 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 LCN2P80188 198 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 CDK5R1Q15078 307 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 CNN3Q15417 329 aaKnown RBP15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 LYPD2Q6UXB3 125 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 OR51A4Q8NGJ6 313 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 AQP3Q92482 292 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 SHARPINQ9H0F6 387 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 LPAR3Q9UBY5 353 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 CDC42EP3Q9UKI2 254 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 ERGIC3Q9Y282 383 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 LRCH1Q9Y2L9 728 aa15.88■□□□□ 0.13
PDLIM7-204ENST00000393546 IGHV3OR15-7A0A075B7D8 119 aa15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 MYL12BO14950 172 aa15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 AKR7A2O43488 359 aa15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 RHBDL1O75783 438 aa15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 GYPAP02724 150 aa15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 HNF1AP20823 631 aa15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 ZFP36P26651 326 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 CR1LQ2VPA4 569 aa15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 UTS2BQ765I0 119 aa15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 TRMT10AQ8TBZ6 339 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 NPRL2Q8WTW4 380 aa15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 CNBD2Q96M20 576 aa15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 BEX2Q9BXY8 128 aa15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 DNAJB11Q9UBS4 358 aa15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 DHDHQ9UQ10 334 aa15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 ANK3Q12955 4377 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-204ENST00000393546 TNFRSF13BO14836 293 aaPredicted RBP15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 ADAM20O43506 726 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 OCM2P0CE71 109 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 OCMP0CE72 109 aaPredicted RBP15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 ATF1P18846 271 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 PRKACBP22694 351 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 GLRA1P23415 457 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 PITPNBP48739 271 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 WNT4P56705 351 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 TAS2R43P59537 309 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 GMFBP60983 142 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 SEC61A1P61619 476 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 GNB2P62879 340 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 CHRFAM7AQ494W8 412 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 FAM120AOSQ5T036 256 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 RNLSQ5VYX0 342 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 XAF1Q6GPH4 301 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 FAHD2BQ6P2I3 314 aaPredicted RBP15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 FAM90A1Q86YD7 464 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 NANOGP1Q8N7R0 232 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 ZNF485Q8NCK3 441 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 RPS4Y2Q8TD47 263 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 TSEN15Q8WW01 171 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 C12orf43Q96C57 262 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 BORCS8Q96FH0 119 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 FAHD2AQ96GK7 314 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 SSBP3Q9BWW4 388 aaPredicted RBP15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 NEK6Q9HC98 313 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 CLN8Q9UBY8 286 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 POLDIP2Q9Y2S7 368 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 POLR3KQ9Y2Y1 108 aaPredicted RBP15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 PCDHGB5Q9Y5G0 923 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 DOCK11Q5JSL3 2073 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 ZFHX3Q15911 3703 aa15.86■□□□□ 0.13
PDLIM7-204ENST00000393546 ARHGAP32A7KAX9 2087 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 PPIAL4CA0A0B4J2A2 164 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 A0A0G2JMP0 313 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 A0A0X1KG70 313 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 A8MXK9 166 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 J3QT63 122 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 PHF1O43189 567 aaPredicted RBP15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 LALBAP00709 142 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 GATA3P23771 443 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms