RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 CROCCP3Q8IVE0 287 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 HIST1H2AAQ96QV6 131 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 SSR3Q9UNL2 185 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 APCP25054 2843 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 AKAP9Q99996 3911 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 IGHV1-69-2A0A0G2JMI3 117 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 F5H5P2 479 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 TMEM178BH3BS89 294 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 PDCD5O14737 125 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 SLC22A1O15245 554 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 HSMCR30P0CW71 290 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 TMEM155Q4W5P6 130 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 COMMD2Q86X83 199 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 SCCPDHQ8NBX0 429 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 ITLN1Q8WWA0 313 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 SLC25A28Q96A46 364 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 FUNDC2Q9BWH2 189 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 PPP1R3EQ9H7J1 279 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 SAP30LQ9HAJ7 183 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 ADRA2CP18825 462 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 PAX5Q02548 391 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 GFOD2Q3B7J2 385 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 SPRNQ5BIV9 151 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 NRIP2Q9BQI9 281 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 GPR173Q9NS66 373 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 POLDIP2Q9Y2S7 368 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 DOPEY2Q9Y3R5 2298 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 A0A0G2JK05 382 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 F5H0A9 414 aaPredicted RBP11.18□□□□□ -0.62
USP44-202ENST00000393091 IGHV2-70P01814 119 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 HPXP02790 462 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 GADD45AP24522 165 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 MKXQ8IYA7 352 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 C10orf105Q8TEF2 133 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 PTX4Q96A99 478 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 RNF170Q96K19 258 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 C1orf147Q96MC9 270 aaPredicted RBP11.18□□□□□ -0.62
USP44-202ENST00000393091 MRI1Q9BV20 369 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 DECR2Q9NUI1 292 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 GSTK1Q9Y2Q3 226 aa11.18□□□□□ -0.62
USP44-202ENST00000393091 ZNF732B4DXR9 585 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 IL1AP01583 271 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 UBBP0CG47 229 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 DAOP14920 347 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 PDZK1IP1Q13113 114 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 LINC00596Q86U02 117 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 OR8S1Q8NH09 359 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 KAAG1Q9UBP8 84 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 POLR3KQ9Y2Y1 108 aaPredicted RBP11.17□□□□□ -0.62
USP44-202ENST00000393091 NPTNQ9Y639 398 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 CADP27708 2225 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 CELSR2Q9HCU4 2923 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 SPRY3O43610 288 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 PPP3R1P63098 170 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 KISS1Q15726 138 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 GPR141Q7Z602 305 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 OR51T1Q8NGJ9 327 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 TBC1D15Q8TC07 691 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 DMRTB1Q96MA1 342 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 NDUFA13Q9P0J0 144 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 RNF7Q9UBF6 113 aa11.17□□□□□ -0.62
USP44-202ENST00000393091 LDLRAD4O15165 306 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 SLC25A16P16260 332 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 PDLIM4P50479 330 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 QRFPP83859 136 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 ODF4Q2M2E3 257 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 C1orf87Q8N0U7 546 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 ZNF671Q8TAW3 534 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 MRPS24Q96EL2 167 aaKnown RBP11.16□□□□□ -0.62
USP44-202ENST00000393091 KCTD7Q96MP8 289 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 SLITRK2Q9H156 845 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 TMEM106BQ9NUM4 274 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 PLCE1Q9P212 2302 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 ASH1LQ9NR48 2969 aaKnown RBP11.16□□□□□ -0.62
USP44-202ENST00000393091 PTPN13Q12923 2485 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A10PA6NDY2 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A18PA6NE21 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A16PA6NEW6 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A20PA6NIJ5 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A8PA6NJQ4 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A7PA6NKC0 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A22PA8MWA6 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A12PA8MX19 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A5PA8MXJ8 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A23PA8MXZ1 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 AKR7A2O43488 359 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A15PP0C7V4 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A13PP0C7W8 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A14PP0C7W9 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 FAM90A24PP0C7X0 464 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 MUC1P15941 1255 aaPredicted RBP11.16□□□□□ -0.62
USP44-202ENST00000393091 OR2W3Q7Z3T1 314 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 BHLHE23Q8NDY6 225 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 OR10AD1Q8NGE0 317 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 OR11L1Q8NGX0 322 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 RAB2BQ8WUD1 216 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 BORCS8Q96FH0 119 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 OR51E2Q9H255 320 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 N6AMT1Q9Y5N5 214 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 SHISA3A0PJX4 238 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms