RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 ERGIC3Q9Y282 383 aa13.49□□□□□ -0.25
CSHL1-204ENST00000392824 TPRKBQ9Y3C4 175 aa13.49□□□□□ -0.25
CSHL1-204ENST00000392824 NSD1Q96L73 2696 aaPredicted RBP13.48□□□□□ -0.25
CSHL1-204ENST00000392824 FAM230AA0A1W2PPH8 454 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 SLC1A7O00341 560 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 ZFPL1O95159 310 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 C21orf33P30042 268 aaPredicted RBP13.48□□□□□ -0.25
CSHL1-204ENST00000392824 HAAOP46952 286 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 FUT6P51993 359 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 GMFBP60983 142 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 LCN2P80188 198 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 HOXA4Q00056 320 aaPredicted RBP13.48□□□□□ -0.25
CSHL1-204ENST00000392824 CNN3Q15417 329 aaKnown RBP13.48□□□□□ -0.25
CSHL1-204ENST00000392824 UBE2V2Q15819 145 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 CNBD2Q96M20 576 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 PDCD1LG2Q9BQ51 273 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 BEX2Q9BXY8 128 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 CHST5Q9GZS9 411 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 SHARPINQ9H0F6 387 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 FKBP14Q9NWM8 211 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 DNAJB11Q9UBS4 358 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 DHDHQ9UQ10 334 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 LRCH1Q9Y2L9 728 aa13.48□□□□□ -0.25
CSHL1-204ENST00000392824 PQLC2LA1A4F0 135 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 F5H0A9 414 aaPredicted RBP13.47□□□□□ -0.25
CSHL1-204ENST00000392824 AKR7A2O43488 359 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 CDK1P06493 297 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 MUC1P15941 1255 aaPredicted RBP13.47□□□□□ -0.25
CSHL1-204ENST00000392824 EGR1P18146 543 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 HNF1AP20823 631 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 GNB2P62879 340 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 CDK5R1Q15078 307 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 TEX36Q5VZQ5 186 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 FAHD2BQ6P2I3 314 aaPredicted RBP13.47□□□□□ -0.25
CSHL1-204ENST00000392824 OR51A4Q8NGJ6 313 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 OR10AC1Q8NH08 325 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 TRMT10AQ8TBZ6 339 aaKnown RBP13.47□□□□□ -0.25
CSHL1-204ENST00000392824 NPRL2Q8WTW4 380 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 TSEN15Q8WW01 171 aaKnown RBP13.47□□□□□ -0.25
CSHL1-204ENST00000392824 AQP3Q92482 292 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 ADAT3Q96EY9 351 aaPredicted RBP13.47□□□□□ -0.25
CSHL1-204ENST00000392824 BORCS8Q96FH0 119 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 FAHD2AQ96GK7 314 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 Q9H521 79 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 NEK6Q9HC98 313 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 LPAR3Q9UBY5 353 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 CDC42EP3Q9UKI2 254 aa13.47□□□□□ -0.25
CSHL1-204ENST00000392824 TANC2Q9HCD6 1990 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 IGHV3OR15-7A0A075B7D8 119 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 SRRM5B3KS81 715 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 OGG1O15527 345 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 ADAM20O43506 726 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 CRLF1O75462 422 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 RHBDL1O75783 438 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 GYPAP02724 150 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 PRKACBP22694 351 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 GLRA1P23415 457 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 PITPNBP48739 271 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 ATP1B3P54709 279 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 RIPPLY3P57055 190 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 TAS2R43P59537 309 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 CR1LQ2VPA4 569 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 CHRFAM7AQ494W8 412 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 XAF1Q6GPH4 301 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 LYPD2Q6UXB3 125 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 UTS2BQ765I0 119 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 FAM90A1Q86YD7 464 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 SERPINA12Q8IW75 414 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 NANOGP1Q8N7R0 232 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 OR5D14Q8NGL3 314 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 GPR148Q8TDV2 347 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 SSBP3Q9BWW4 388 aaPredicted RBP13.46□□□□□ -0.25
CSHL1-204ENST00000392824 CLN8Q9UBY8 286 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 OR5V1Q9UGF6 321 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 POLDIP2Q9Y2S7 368 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 PCDHGB5Q9Y5G0 923 aa13.46□□□□□ -0.25
CSHL1-204ENST00000392824 FN1P02751 2386 aaKnown RBP13.46□□□□□ -0.25
CSHL1-204ENST00000392824 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.45□□□□□ -0.26
CSHL1-204ENST00000392824 A0A0G2JMP0 313 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 A0A0X1KG70 313 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 J3QT63 122 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 PHF1O43189 567 aaPredicted RBP13.45□□□□□ -0.26
CSHL1-204ENST00000392824 RRP9O43818 475 aaKnown RBP13.45□□□□□ -0.26
CSHL1-204ENST00000392824 ATF1P18846 271 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 GATA3P23771 443 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 ZFP36P26651 326 aaKnown RBP13.45□□□□□ -0.26
CSHL1-204ENST00000392824 WNT4P56705 351 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 SEC61A1P61619 476 aaKnown RBP13.45□□□□□ -0.26
CSHL1-204ENST00000392824 FAM120AOSQ5T036 256 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 DCAF12L2Q5VW00 463 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 RNLSQ5VYX0 342 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 ANGPTL5Q86XS5 388 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 DNAAF1Q8NEP3 725 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 OR4M2Q8NGB6 313 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 TMIGD2Q96BF3 282 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 C12orf43Q96C57 262 aaKnown RBP13.45□□□□□ -0.26
CSHL1-204ENST00000392824 SMIM19Q96E16 107 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 ZNF184Q99676 751 aaPredicted RBP13.45□□□□□ -0.26
CSHL1-204ENST00000392824 MND1Q9BWT6 205 aa13.45□□□□□ -0.26
CSHL1-204ENST00000392824 ZCCHC4Q9H5U6 513 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms